| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0745 |
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| Symbol | |
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| ID | 6178297 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 833047 |
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| End bp | 833826 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 74% |
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| IMG OID | 641680493 |
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| Product | putative transmembrane anti-sigma factor |
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| Protein accession | YP_001807457 |
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| Protein GI | 172059805 |
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| COG category | [K] Transcription |
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| COG ID | [COG5662] Predicted transmembrane transcriptional regulator (anti-sigma factor) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0155499 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGACG ATCCGCGCAA ACCTTCGAAC GATCGGGACG ACGCTGCATC GGCCCAGCTG
CTGTCGGCGC TGCTCGACGG CGAGCTGTCC GGGCAGGAGC GCCGCGAGGT GCTCGAGCGG
CTGGAGTCCG ATCCGCGGGA AGCCGAGCGC TTCGCGCATT ACAGCGCGCA GCGTGACGCG
TTGCGCGCGC TGTTCCCGCT GCCGGGCGCC GCGTCGGCAT TGTTCGTGCA GCGGCGCGCG
TCGCGCCGGC GCCTTGCTTA TGCGTTCGCG GGGCTGGCGG CCGGGCTGGT GCTCGGCATC
GCGCTGCACG TGGGCTGGAC GGCGTTCGGC GTCGAACCGG CGTTCGCCGC GCGCGCGGAT
GTCGCGTATG CGGTGTACGC GGCCGATCGC GAACACCCGG TCGAGATCGA TGCCCGCGAC
CCCACGCGTC TGGCCGGATG GCTGTCCGCG CGTCTCGGCC GGCCCGTGCG GGCGCCGTCG
CTCGACGAAT ACGGCTACGT GCTGCTGGGC GGGCGCCTGC TGCCGGGCGA CGCGGGGCCG
GCCGCGCAGT TGATGTACCA GCGCGCGGAC GGCGCGCGCG TGACGCTGTA CATGACGGCC
TACGATGCAC GGCGCCTCGC GCCGCGGGCG ATGTCGGCGG ACGGACGCTA CACGTATTTC
TGGTCGGATC GCGGCATGGG CTACGCGCTG TCCGGCCGCG GCGACGAACG GCGCCTGCGC
GAGCTCGCGA TCGACGCGTG CGGCGCGCTC GGCGGGCCGA CCGACGCATG GAAGGGGTGA
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| Protein sequence | MDDDPRKPSN DRDDAASAQL LSALLDGELS GQERREVLER LESDPREAER FAHYSAQRDA
LRALFPLPGA ASALFVQRRA SRRRLAYAFA GLAAGLVLGI ALHVGWTAFG VEPAFAARAD
VAYAVYAADR EHPVEIDARD PTRLAGWLSA RLGRPVRAPS LDEYGYVLLG GRLLPGDAGP
AAQLMYQRAD GARVTLYMTA YDARRLAPRA MSADGRYTYF WSDRGMGYAL SGRGDERRLR
ELAIDACGAL GGPTDAWKG
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