| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0697 |
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| Symbol | |
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| ID | 6178987 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 783837 |
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| End bp | 784514 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641680445 |
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| Product | protein TolQ |
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| Protein accession | YP_001807409 |
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| Protein GI | 172059757 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0811] Biopolymer transport proteins |
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| TIGRFAM ID | [TIGR02796] TolQ protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.772794 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACACTT CTCAAGACCT GTCGATCATT TCCCTCGTCC TCAACGCGAG CGTGCTGGCC
CAGGCCGTGA TGGGGCTGCT GTTGCTGCTG TCGCTGATGT CGTGGACCTT CATTTTCCGC
AAGTGGTTCG CGATTCGCCG CGCACGCGCG CAGACCGAAC GCTTCGAACG GGATTTCTGG
TCGGGCGGCG ACCTGCAGGC GCTGTATCAG AGCGCGGCCA ACAACCGCCA CACGATCGGC
GCGCTCGAGC GGATCTTCGA ATCGGGGATG CGTGAATTCC TGAAGGCGAA GGAAAAGCGC
CTCACCGATC CGGGCCTCGT GCTCGACGGT GCGCGCCGCG CGATGCGCGC GTCGTTCCAG
CGCGAAATGG ACGTGCTCGA AGCGAACCTC GCGTTCCTCG CGTCGGTCGG CTCGGTCAGC
CCGTACATCG GTCTGTTCGG CACCGTGTGG GGGATCATGA ACTCGTTCCG CGGCCTCGCG
AACGTGCAGC AGGCCACGCT CGCGAACGTC GCGCCGGGCA TCGCCGAGGC GCTCGTCGCC
ACCGCGATCG GCCTGTTCGC CGCGATTCCG GCGGTGGTCG CGTACAACCG CTACGCGCAC
GACATCGACC GCCTCGCGAT CCGCTTCGAG ACCTTCATCG AAGAGTTCTC GAACATCCTG
CAGCGTCAGG CCCAGTAA
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| Protein sequence | MNTSQDLSII SLVLNASVLA QAVMGLLLLL SLMSWTFIFR KWFAIRRARA QTERFERDFW
SGGDLQALYQ SAANNRHTIG ALERIFESGM REFLKAKEKR LTDPGLVLDG ARRAMRASFQ
REMDVLEANL AFLASVGSVS PYIGLFGTVW GIMNSFRGLA NVQQATLANV APGIAEALVA
TAIGLFAAIP AVVAYNRYAH DIDRLAIRFE TFIEEFSNIL QRQAQ
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