Gene BamMC406_0682 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_0682 
Symbol 
ID6178127 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp769286 
End bp770479 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content73% 
IMG OID641680429 
Productmajor facilitator transporter 
Protein accessionYP_001807394 
Protein GI172059742 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID[TIGR00880] Multidrug resistance protein 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAATCCGT CCCTGATTGC CATCCTCGCC ACGGTATTGC TCGACGCGAT CGGCGTCGGG 
ATCGTGATGC CGATCCTGCC CGGCCTGCTG CGCACGCTCG CCGGCGCCGG CAGCACCGAC
ACCCACTACG GGATCCTGCT CGCGCTGTAC GCGTTCGCCC AATTCCTGTG CGCCCCGCTG
CTCGGCACAC TGAGCGACCG CTTCGGCCGG CGGCCCGTCC TGCTCGCGTC GCTTGCCGGC
GCCGCGCTCG ACTATTTGCT GATGGCACTC GCGCCGACGC TGGCCTGGCT TTACGTCGGG
CGGCTGATCG CCGGCATCAC CGGCGCGAAC GTCGCGGTCG CGACCGCGTA CGTGACCGAC
GTCACGGCCG AACCCGACCG CGCACGGCGC TTCGGCCAGC TCGGCGCGAT GATGGGCGTC
GGCTTCATAG CGGGCCCGCT GATCGGCGGG CTGTTCGGCG CGCTGCACCT GCGCGCGCCG
TTCGTCGCAG CCGCGCTGCT CAATGCGCTG AACCTCGCGC TCGTGTGGCG CGCGCTGCCG
GAATCGCGTC CGCGCGCGGC CCGGGAAAGT CGCGGGCTCG CCACGCTCAA CCCGTTCGCC
GGCCTGCGCC GGCTGAGCGG CGCGCCCGCG CTCGTGCCGC TGATCGGCAT CTACGTGATC
GTCGCGCTGG TGTCGCAGGC GCCCGCGACG CTGTGGATTC TGTACGGCCA GGAACATTTC
GGCTGGTCCA CGCCGGTCGC CGGGCTGTCG CTCGCCGGCT ACGGCGCGTG CCACGCGCTC
GCGCAGGCCT TCGCGATCGG GCCGCTGATC GCACGGCTCG GCGAGCGCCG CGCACTCGCG
CTGGGCCTCG CGGGCGACGC GCTCGGGCTG GTGGTGATCG CGTTCGCGAC GGCCGCATGG
GTGCCGTTCG CGTTGCTGCC GCTGTTCGCG GCGGGTGGCA TGACGCTGCC GGCGTTGCAG
GCGATGCTCG CGCGTCAGGT CGACGATGCC CGCCAGGGCG AACTGCAGGG CACGCTCGCG
AGCGTGACGA GCCTGATCGG CGTCGCAGGG CCGCTCGTCG TCACGACGAC CTACGCGGCC
ACTCGCGGCA CGTGGCCGGG ACTCGTATGG GCCGCGGCCG CGCTGCTCTA TCTGCTGGTG
CCGCCGTTGC TGGCGGGCGC GCGCCCGACG AGCGCAGCGC GGCCGGCCGC GTGA
 
Protein sequence
MNPSLIAILA TVLLDAIGVG IVMPILPGLL RTLAGAGSTD THYGILLALY AFAQFLCAPL 
LGTLSDRFGR RPVLLASLAG AALDYLLMAL APTLAWLYVG RLIAGITGAN VAVATAYVTD
VTAEPDRARR FGQLGAMMGV GFIAGPLIGG LFGALHLRAP FVAAALLNAL NLALVWRALP
ESRPRAARES RGLATLNPFA GLRRLSGAPA LVPLIGIYVI VALVSQAPAT LWILYGQEHF
GWSTPVAGLS LAGYGACHAL AQAFAIGPLI ARLGERRALA LGLAGDALGL VVIAFATAAW
VPFALLPLFA AGGMTLPALQ AMLARQVDDA RQGELQGTLA SVTSLIGVAG PLVVTTTYAA
TRGTWPGLVW AAAALLYLLV PPLLAGARPT SAARPAA