Gene BamMC406_0667 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_0667 
Symbol 
ID6178821 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp754809 
End bp755354 
Gene Length546 bp 
Protein Length181 aa 
Translation table11 
GC content68% 
IMG OID641680414 
Productheat shock protein GrpE 
Protein accessionYP_001807379 
Protein GI172059727 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0576] Molecular chaperone GrpE (heat shock protein) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.151401 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAACA CGCAAGAGAA CCCGGCTACC CCATCGGCCG ATGACATCGG CAGCGAGAAG 
CAGGCGGCGC AAGGCGCTGC TCCCGCCGCC GAAGCAGCCG ACGCGGCGCT CGCGGAGGCT
CAAGCCAAGG TCGCCGAGCT GCAGGAGAGC TATCTCCGGG CGAAGGCCGA GACGGAGAAC
GTCCGCCGCC GCGCGCAGGA CGACGTCTCG AAGGCGCACA AGTTTGCGAT CGAGAGCTTC
GCCGAGCACC TGCTGCCGGT GCTGGACAGC CTCGAGGCCG CCGTCGGCGA CACGTCCGGC
GACATCACGA AGGTACGCGA AGGCGTCGAG CTGACGCTGC GCCAGTTGAC GAGCGCGCTC
GAGAAGGGCC GTGTCGTCGC GATCAACCCG GTCGGCGAGA AGTTCGATCC GCACCAGCAC
CAGGCGATTT CGATGGTGCC GGCCGAGCAG GAGCCGAACA CCGTCGTGAC CGTCCTGCAA
AAGGGCTACA TGATCGCCGA CCGCGTGCTG CGCCCGGCGC TCGTCACGGT CGCCCAGCCG
AAGTAA
 
Protein sequence
MENTQENPAT PSADDIGSEK QAAQGAAPAA EAADAALAEA QAKVAELQES YLRAKAETEN 
VRRRAQDDVS KAHKFAIESF AEHLLPVLDS LEAAVGDTSG DITKVREGVE LTLRQLTSAL
EKGRVVAINP VGEKFDPHQH QAISMVPAEQ EPNTVVTVLQ KGYMIADRVL RPALVTVAQP
K