Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_0634 |
Symbol | secF |
ID | 6178034 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | - |
Start bp | 712847 |
End bp | 713797 |
Gene Length | 951 bp |
Protein Length | 316 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 641680382 |
Product | preprotein translocase subunit SecF |
Protein accession | YP_001807347 |
Protein GI | 172059695 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0341] Preprotein translocase subunit SecF |
TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family [TIGR00966] protein-export membrane protein SecF |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAATTTT TCCGCATCCG TAAAGACATT CCGTTCATGC GGCACGCGCT GGTGTTCAAC GTGATCTCGC TGGTCACGTT CCTCGCCGCC GTGTTCTTCC TGTTCCACCG CGGGCTGCAC CTGTCCGTCG AATTCACCGG CGGTACGGTG ATCGAGGTCC AGTACCAGCA GGCCGCGCAG CTCGAACCCG TGCGCGCCAC GCTCGGCAAG CTCGGCTACG CCGATGCGCA GGTGCAGAAC TTCGGCACGT CGCGCAACGT GCTGATCCGC CTGCAGCTGA AGGAAGGCCT CACGTCCGCG CAGCAGAGCG ATCAGGTGAT GACCGCACTG AAGGCGCAGA GCCCCGACGT GTCGCTGCAG CGCGTCGAGT TCGTCGGCCC GCAGGTCGGC CGCGAGCTCG CGACCGACGG TCTCCTCGCG CTCGCGTGCG TCGTGATCGG CATCGTGATC TACCTGTCGA TCCGCTTCGA ATGGAAGTAC GCGGTCGCCG GCATCATCGC GAACCTGCAC GACGTCGTGA TCATTCTCGG TTTCTTCGCG TTCTTCCAGT GGGAGTTCTC GCTGGCGGTG CTCGCGGCGA TCCTCGCGGT GCTCGGCTAC TCGGTCAACG AGTCGGTCGT CATCTTCGAC CGGATCCGCG AAACGTTCCG CCGCGAACGC AGGATGAGCG TGTCGGAAGT GATCAACCAC GCGATCACGA CGACGATGTC ACGCACGATC ATCACGCACA CGTCGACGGA AATGATGGTG CTGTCGATGT TCTTCTTCGG CGGCCCGACG CTGCACTACT TCGCGCTCGC GCTGACGGTC GGCATCATGT TCGGCATCTA CTCGTCGGTG TTCGTCGCGG GCTCGCTCGC GATGTGGCTC GGCATCAAGC GCGAAGACCT GATCAAGGAC AGGAAGAGCG CACACGATCC GGACGATCCG AACGCGGGCG CGCAGGTTTG A
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Protein sequence | MEFFRIRKDI PFMRHALVFN VISLVTFLAA VFFLFHRGLH LSVEFTGGTV IEVQYQQAAQ LEPVRATLGK LGYADAQVQN FGTSRNVLIR LQLKEGLTSA QQSDQVMTAL KAQSPDVSLQ RVEFVGPQVG RELATDGLLA LACVVIGIVI YLSIRFEWKY AVAGIIANLH DVVIILGFFA FFQWEFSLAV LAAILAVLGY SVNESVVIFD RIRETFRRER RMSVSEVINH AITTTMSRTI ITHTSTEMMV LSMFFFGGPT LHYFALALTV GIMFGIYSSV FVAGSLAMWL GIKREDLIKD RKSAHDPDDP NAGAQV
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