Gene BamMC406_0634 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_0634 
SymbolsecF 
ID6178034 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp712847 
End bp713797 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content63% 
IMG OID641680382 
Productpreprotein translocase subunit SecF 
Protein accessionYP_001807347 
Protein GI172059695 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0341] Preprotein translocase subunit SecF 
TIGRFAM ID[TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATTTT TCCGCATCCG TAAAGACATT CCGTTCATGC GGCACGCGCT GGTGTTCAAC 
GTGATCTCGC TGGTCACGTT CCTCGCCGCC GTGTTCTTCC TGTTCCACCG CGGGCTGCAC
CTGTCCGTCG AATTCACCGG CGGTACGGTG ATCGAGGTCC AGTACCAGCA GGCCGCGCAG
CTCGAACCCG TGCGCGCCAC GCTCGGCAAG CTCGGCTACG CCGATGCGCA GGTGCAGAAC
TTCGGCACGT CGCGCAACGT GCTGATCCGC CTGCAGCTGA AGGAAGGCCT CACGTCCGCG
CAGCAGAGCG ATCAGGTGAT GACCGCACTG AAGGCGCAGA GCCCCGACGT GTCGCTGCAG
CGCGTCGAGT TCGTCGGCCC GCAGGTCGGC CGCGAGCTCG CGACCGACGG TCTCCTCGCG
CTCGCGTGCG TCGTGATCGG CATCGTGATC TACCTGTCGA TCCGCTTCGA ATGGAAGTAC
GCGGTCGCCG GCATCATCGC GAACCTGCAC GACGTCGTGA TCATTCTCGG TTTCTTCGCG
TTCTTCCAGT GGGAGTTCTC GCTGGCGGTG CTCGCGGCGA TCCTCGCGGT GCTCGGCTAC
TCGGTCAACG AGTCGGTCGT CATCTTCGAC CGGATCCGCG AAACGTTCCG CCGCGAACGC
AGGATGAGCG TGTCGGAAGT GATCAACCAC GCGATCACGA CGACGATGTC ACGCACGATC
ATCACGCACA CGTCGACGGA AATGATGGTG CTGTCGATGT TCTTCTTCGG CGGCCCGACG
CTGCACTACT TCGCGCTCGC GCTGACGGTC GGCATCATGT TCGGCATCTA CTCGTCGGTG
TTCGTCGCGG GCTCGCTCGC GATGTGGCTC GGCATCAAGC GCGAAGACCT GATCAAGGAC
AGGAAGAGCG CACACGATCC GGACGATCCG AACGCGGGCG CGCAGGTTTG A
 
Protein sequence
MEFFRIRKDI PFMRHALVFN VISLVTFLAA VFFLFHRGLH LSVEFTGGTV IEVQYQQAAQ 
LEPVRATLGK LGYADAQVQN FGTSRNVLIR LQLKEGLTSA QQSDQVMTAL KAQSPDVSLQ
RVEFVGPQVG RELATDGLLA LACVVIGIVI YLSIRFEWKY AVAGIIANLH DVVIILGFFA
FFQWEFSLAV LAAILAVLGY SVNESVVIFD RIRETFRRER RMSVSEVINH AITTTMSRTI
ITHTSTEMMV LSMFFFGGPT LHYFALALTV GIMFGIYSSV FVAGSLAMWL GIKREDLIKD
RKSAHDPDDP NAGAQV