Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_0623 |
Symbol | |
ID | 6178074 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | - |
Start bp | 700105 |
End bp | 701403 |
Gene Length | 1299 bp |
Protein Length | 432 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641680371 |
Product | putative RNA methylase |
Protein accession | YP_001807336 |
Protein GI | 172059684 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0116] Predicted N6-adenine-specific DNA methylase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.244531 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCTCGC CCACCCTGTA CGAATTCTTC GCTCCCTGCC CGCGCGGCCT CGAAGCGGTG CTTGCCGCCG AGCTGGCCGA AATCGCCGGC CGCCATCTGG ACGGCGCGCC GTTCACCGCG GGCGCGCAGG TCCCGGGCGG CGTTCATTTC CGCGGCGGCT GGGCCGCCGG CATGGCCGCG AACCTCCATT CGCGAATTGC GAGCCGGATC CTGCTGAAGA TCGCGCACCG CCCGTACCGC ACCGAACAGG ACGTCTACGC GCTCGCGCTC GAGCAGCCGT GGGAACGCTG GTTCGCGTCG ACGCAGACGC TGCGCGTCGA CATCACCGCG ATCAAGTCGC CGCTGAAGAG CCTCGAATTC GCGACGCTGC GCGTGAAGGA CGCGATCTGC GACCGGATGC GCGAGAAGAC CGGCTCGCGG CCGAGCATCG ACACCGGCGC GCCGGACGTG CGCGTGTTCG CGTTCCTGAC GGCCACCGAG TGCACGCTGT ACCTCGATAC GTCGGGCGAG CCGCTGTTCA AGCGCGGCTG GCGTCTCGAC AAGGGCGCGG CGCCGCTGCG CGAGAACCTC GCGGCCGGCA TCCTGCGCCT GACGGGCTGG ACGCCCGGCA CCCCGCTGTA CGACCCGATG TGCGGCAGCG GCACGTTCCT CGCGGAAGCC GCGCAGATCG CGCTCGGCGT CGCGCCGGGC GTCGAGCGCC GTTTCGGCTT CGAAAAGCTC AAGCAGTACG ACATCACCGC ATGGCAGGGC CTGAAGGTCC CGGCGCTCGA CGCGAAGCGC GCGGCGCGCG GCAAGCGCGA GGCGCTCGGC GTGTACGGCA GCGACATCTC CGGCGACATG CTCGAGAAGG CGCGCGCGAA CCTCGAGCGC GCGGGCGTGC CGTCGGTGTG GCTCAAGCAG GTCGACGCGC GCGGCATGAC GCCGCCGTGC GACGGCCCGG GCATCATCCT CGCGAACCCG CCGTACGGCG AGCGGATCGA GGTGCGCGGC CGCAGCGCGC GCGGCGAGGT ACGCGAGACG GGCCGCAACC GCGACAACGA CGACGCATTC CGCCGCACCC ACACCGACGC GCCGGACAGC GAGTTCTTCA ACGCGCTCGG CGATGCGCTC AAGCAGCGCT TCACGGGCTG GCAAGCGTTC CTGCTGACGT CGGACCGGTC GCTGCCGGGC CTGCTGCGGC TGCGCGAATC GGCGAAGACG CCGCTGTTCA ACGGCGCGCT CGAATGCCGG CTGTTCCGCT TCGACCTGAT CGCCGGCAGC GTGAAGGCAC GGCCGGCCGC GCCGGAAGGC GACGCCTGA
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Protein sequence | MSSPTLYEFF APCPRGLEAV LAAELAEIAG RHLDGAPFTA GAQVPGGVHF RGGWAAGMAA NLHSRIASRI LLKIAHRPYR TEQDVYALAL EQPWERWFAS TQTLRVDITA IKSPLKSLEF ATLRVKDAIC DRMREKTGSR PSIDTGAPDV RVFAFLTATE CTLYLDTSGE PLFKRGWRLD KGAAPLRENL AAGILRLTGW TPGTPLYDPM CGSGTFLAEA AQIALGVAPG VERRFGFEKL KQYDITAWQG LKVPALDAKR AARGKREALG VYGSDISGDM LEKARANLER AGVPSVWLKQ VDARGMTPPC DGPGIILANP PYGERIEVRG RSARGEVRET GRNRDNDDAF RRTHTDAPDS EFFNALGDAL KQRFTGWQAF LLTSDRSLPG LLRLRESAKT PLFNGALECR LFRFDLIAGS VKARPAAPEG DA
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