| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0551 |
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| Symbol | pyrF |
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| ID | 6177673 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 621715 |
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| End bp | 622542 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641680299 |
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| Product | orotidine 5'-phosphate decarboxylase |
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| Protein accession | YP_001807264 |
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| Protein GI | 172059612 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0284] Orotidine-5'-phosphate decarboxylase |
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| TIGRFAM ID | [TIGR02127] orotidine 5'-phosphate decarboxylase, subfamily 2 |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.771334 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.817763 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTTCCC CGCTTACTTT CATCGAATCG CTGCGCGCCG CGTGGCAGCG CACGAATTCG
CTGCTGTGCG TCGGCCTCGA TCCCGAGCCG TCGCGCTTTC CCGTGCAGTT CGACGGCCAG
CCCGACGCGA TTTTCGAATT CTGCCGGCAG ATCGTCGACG CGACCGCGCC GTATGCGAGC
GCATTCAAGC CGCAGATCGC GTACTTCGCC GCGCATCGCG CCGAAGACCA GCTCGAACGC
CTGATCGCGC ACATCCACCT CCAGCATCCG GGCCTGCCGG TGATCCTCGA CGCGAAGCGC
GGCGACATCG GCAGCACCGC CGAGCAGTAC GCGCGCGAGG CGTTCGAGCG CTATCGCGCC
GACGCCGTCA CCGTGAACCC GTACATGGGC TACGACTCGG TCGAGCCGTA CTTCGAGCAT
GAAGGCAAGG GCGTGATCGT GCTGTGCCGC ACGTCGAACC CGGGTGGCTC GGATCTTCAG
TTCCTCGACA CGAACGGCCG GCCGCTGTAC CAGGTCGTGG CCGATCTCGC GGCGAACAAG
TGGAATGCGA AGAACGGCCA GCTCGGCCTC GTGGTGGGCG CGACGTTCCC GAACGAAATC
GAGATCGTGC GCGGGATCGT CGGCGACATG CCGCTGCTGA TTCCCGGCAT CGGCGCGCAG
GGCGGCGACG TGGAGGCCAC CGTCAACGCG GGCCGCACGG CCGACGGCAC CGGAATGATG
ATCAACTCGT CGCGCGCGAT CCTGTACGCG AGCAAGGGCG AGGATTTCGC CGAAGCCGCG
GCGCTCGCGG CGCAGAAGAC GCGCGACACG ATCAACGCGC ATCGCTGA
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| Protein sequence | MSSPLTFIES LRAAWQRTNS LLCVGLDPEP SRFPVQFDGQ PDAIFEFCRQ IVDATAPYAS
AFKPQIAYFA AHRAEDQLER LIAHIHLQHP GLPVILDAKR GDIGSTAEQY AREAFERYRA
DAVTVNPYMG YDSVEPYFEH EGKGVIVLCR TSNPGGSDLQ FLDTNGRPLY QVVADLAANK
WNAKNGQLGL VVGATFPNEI EIVRGIVGDM PLLIPGIGAQ GGDVEATVNA GRTADGTGMM
INSSRAILYA SKGEDFAEAA ALAAQKTRDT INAHR
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