| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0545 |
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| Symbol | |
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| ID | 6176541 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 614847 |
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| End bp | 615626 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641680293 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001807258 |
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| Protein GI | 172059606 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.074184 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGACGTC TCGCGGGCAA GGTCGCGGCG GTGACGGGCG CGGGCCGCGG GATCGGCGCC
GCGATCGCGC AGGCGTTCGC GCGCGAGGGC GCGGCCGTCG CGCTCGTCGA CCTCGACTTC
CCGCAGGCGC AGCGCACGGC GGCTGCGATC GCCGCCGCTA TCGACGGCGC GCGCGTGCTC
GCGTTGCACG CGGACGTCGC GCGGCAGGAC TCGGTGCGCG ACGCGTTCGC GCAGACCGAA
GCCGCGCTCG GCCCGCTCGA CGTGCTGGTG AACAACGCCG GCATCAACGT GTTCGCCGAT
CCGCTGACGA TGACGGACGA CGACTGGCGC CGCTGCTTCG CGGTCGATCT CGACGGCGTG
TGGCACGGCT GCCGCGCGGC GCTGCCCGGG ATGGTCGAAC GCGGTCGCGG CAGCATCGTG
AACATCGCGT CGACGCATGC GTTCCGGATC ATCCCGGGCT GCTTTCCGTA CCCGGTCGCG
AAACACGGCG TGCTGGGCCT CACGCGTGCG CTCGGCATCG AATACGCGGC GCGCAACGTG
CGGATGAACG CGATCGCGCC CGGCTACATC GAGACGCAGC TGACGCGCGA CTGGTGGGAT
GCGCAGGCCG ACCCGGCCGC GGCGCGCGCC GAGACGCTCG CGCTGCAGCC GATGAAGCGG
ATCGGCAAAC CGGAGGAAGT CGCGATGACG GCCGTGTTCC TCGCGTCCGA CGAGGCGCCG
TTCATCAATG CCGCGTGCAT CACCGTCGAT GGCGGACGCG CGGCGCTGTA CCACGATTGA
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| Protein sequence | MGRLAGKVAA VTGAGRGIGA AIAQAFAREG AAVALVDLDF PQAQRTAAAI AAAIDGARVL
ALHADVARQD SVRDAFAQTE AALGPLDVLV NNAGINVFAD PLTMTDDDWR RCFAVDLDGV
WHGCRAALPG MVERGRGSIV NIASTHAFRI IPGCFPYPVA KHGVLGLTRA LGIEYAARNV
RMNAIAPGYI ETQLTRDWWD AQADPAAARA ETLALQPMKR IGKPEEVAMT AVFLASDEAP
FINAACITVD GGRAALYHD
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