Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_0544 |
Symbol | |
ID | 6178630 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 614170 |
End bp | 614847 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 641680292 |
Product | 2-dehydro-3-deoxy-6-phosphogalactonate aldolase |
Protein accession | YP_001807257 |
Protein GI | 172059605 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0800] 2-keto-3-deoxy-6-phosphogluconate aldolase |
TIGRFAM ID | [TIGR01182] Entner-Doudoroff aldolase |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.481337 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGTCCG AACTCACGTT GCCCGCGCCG TACACGCCGC ATCCCGCGTT GATGCGGGCG TTCGACGCGT GCCCGCTGAT CGCGATCATG CGCGGCATCA CGCCCGCCGA AGCGGCCGAC CACGGCCTCG CGCTGCACGA AGCCGGCGTG CGGATCGTCG AGGTGCCGCT CAACTCGCCC GATCCGTTCG ACAGCATCGC GGCGCTGCGC CGCGCGTTGC CGGACGACAT GATCGTCGGC GCGGGCACCG TGCTGCGCGC CGAATTCGTC GACCGCGTGC AGGACGCCGG CGGCACGCTG ATCGTGATGC CGCACAGCGA CGCGGCCGTG ATCCGCCGCG CGCGCGAGCG CGGGCTCGCG AGCGCACCGG GCGTCGCGAC GCCGACCGAG GCGTTCGCCG CGCTCGCGAA CGGCGCCGAC GTGCTGAAGA TGTTCCCGGC CGAGCAGCTC GGCGTGCCGG TCGTGAAGGC GTGGCGCGCG GTGATCGACC GCGCGGTGCC GCTGCTTCCG GTCGGCGGGA TTACGCCGGA CAACATGCAG CCGTTCCTCG CGGCCGGCGC TAACGGCTTC GGCCTCGGCT CCGCGCTGTA CCGGCCCGGC CAGTCGGCGG ACACGACCCT CGCGAATGCG CGCGCGTTCC AGGCCGGCCT GCGCGCGGCG CTGGGCGGAG CCGCATGA
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Protein sequence | MSSELTLPAP YTPHPALMRA FDACPLIAIM RGITPAEAAD HGLALHEAGV RIVEVPLNSP DPFDSIAALR RALPDDMIVG AGTVLRAEFV DRVQDAGGTL IVMPHSDAAV IRRARERGLA SAPGVATPTE AFAALANGAD VLKMFPAEQL GVPVVKAWRA VIDRAVPLLP VGGITPDNMQ PFLAAGANGF GLGSALYRPG QSADTTLANA RAFQAGLRAA LGGAA
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