| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0529 |
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| Symbol | prmA |
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| ID | 6178610 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 598639 |
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| End bp | 599541 |
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| Gene Length | 903 bp |
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| Protein Length | 300 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 641680277 |
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| Product | ribosomal protein L11 methyltransferase |
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| Protein accession | YP_001807242 |
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| Protein GI | 172059590 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2264] Ribosomal protein L11 methylase |
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| TIGRFAM ID | [TIGR00406] ribosomal protein L11 methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.579214 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTATC GCGAACTCGT CGTCGAACTG GCCCGTGAGC ATGCGGAGGC GCTGTCCGAC
GCGCTGCTCG AACTCGGCGC GCTGTCGGTG TCCGTCGAAG ACGCCGACGC CGACACGCCC
GACGAACAGC CGCTCTTCGG CGAGCCCGGC CTGGTTCCCG ATCGCACCGC GTGGCAGCAC
TCGCGCGTGA TCGCGCTGCT GTCGCCCGAT CACGAGCCGG CCGTGCTGCT CGCGGCGGCC
GTGAACGACA TCGGCGTCAC CGAAACCCCG AAGTTCGATG TGCGCGAAGT CGAGGAACAG
GACTGGGTGC GGCTCACGCA GTCGCAATTC GAGCCGATTC CGATCGGCGA GCGCATCTGG
GTCGTGCCGT CGTGGCACGA CGCGCCCGAC CCCGACGCGT TGATCCTCGA ACTCGACCCC
GGTCTCGCGT TCGGCACCGG CAGCCACCCG ACCACGCGCC TGTGCATGGA ATGGCTCGAA
CAGTCGGTGA AGCCGGGCCA GTCGGTCCTC GACTACGGCT GCGGCTCGGG CATTCTCGCG
ATCCTCGCGC GCAAATGCGG GGCGAACCCC GTGGTGGGCA TCGACATCGA TCCGCAGGCG
GTCGAGTCGG CGCGGCAGAA CAGCGAACGC AACCACGCGG AAGTCACGTA CGGGCTGCCC
GACGCGTGCC CGGCCGGCGA ATTCGACATC GTCGTCGCGA ACATCCTGTC GAACCCGCTG
AAGCTGATGG CGTCGATGCT CGCATCGAAG GTGAAACCGG GCGGGCGCAT CGCGCTGTCG
GGCGTGCTCG CGCGCCAGGC GGACGAAGTC GCGGCCGTCT ATGCACGCTA CGTCGACATC
TCGGTCTGGC GCGAACACGA AGGTTGGGTG TGCCTCGCCG GAACCCGGCG CGAAAGCCAT
TAG
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| Protein sequence | MSYRELVVEL AREHAEALSD ALLELGALSV SVEDADADTP DEQPLFGEPG LVPDRTAWQH
SRVIALLSPD HEPAVLLAAA VNDIGVTETP KFDVREVEEQ DWVRLTQSQF EPIPIGERIW
VVPSWHDAPD PDALILELDP GLAFGTGSHP TTRLCMEWLE QSVKPGQSVL DYGCGSGILA
ILARKCGANP VVGIDIDPQA VESARQNSER NHAEVTYGLP DACPAGEFDI VVANILSNPL
KLMASMLASK VKPGGRIALS GVLARQADEV AAVYARYVDI SVWREHEGWV CLAGTRRESH
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