Gene BamMC406_0502 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_0502 
Symbol 
ID6178280 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp569693 
End bp570448 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content63% 
IMG OID641680249 
Producthypothetical protein 
Protein accessionYP_001807215 
Protein GI172059563 
COG category[S] Function unknown 
COG ID[COG4582] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.187312 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.328547 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGATTCTTT ACGAGTATCC GTTCAACGAG CGAATTCGCA CGCTGTTGCG CCTTGAAGAC 
TTGTTCGAGC GCTTCGCGTT CTTTTTGGCT CAGGAGGACC CGCGTGAACA TCACGTCGCG
CTGACGACGC TGTTCGAAAT CGCCGAGGTC ACGGGCCGCG CGGACCTGAA ATCGGATCTG
ATGAAGGAGC TCGAACGTCA ACGCCAGACG CTCGCCCCCT TTCGCGGCAA TCCGGGCATC
GAACAGAATG CGCTCGAAGC CGTGCTCGGT GAAATCGAGC AGACGCTCGC CAATCTTGCG
CAGATGCAGG GCAAGACCGG GCAGCACCTG GTCGACAACG AGTGGCTCGC CAGCATCCGC
AGCCGCGCGG TGATTCCCGG CGGCACGTGC AAGTTCGACC TGCCGTCGTA CTATGCGTGG
CAGCAATGGC CCGCGGAACA GCGGCGCCAG GACATCGCGA AATGGATCAT GCCGCTGCTG
CCGCTGCGCG ACGCGGCGGC AATCGTGCTG CGGCTCGCTC GCGAATCGGG TCAGGCGTCG
AAGGTGATGG CGATGCAGGG CAGCTATCAG CAGATGCTGT CGGGGCGCAG CTACCAGCTG
ATGCAGGTGC GCGTGCCGCC GGAACTGCGC GTGATTCCCG AAGCGAGCGC CAACAAATAC
ATGCTGTGGG TACGGTTCAC CATGCAGGAC GGCGACGTGC GGCCGCGCGC GGTGGACATC
GACGTGCCGT TCCATCTGAC ACTGTGCAAT CTGTAA
 
Protein sequence
MILYEYPFNE RIRTLLRLED LFERFAFFLA QEDPREHHVA LTTLFEIAEV TGRADLKSDL 
MKELERQRQT LAPFRGNPGI EQNALEAVLG EIEQTLANLA QMQGKTGQHL VDNEWLASIR
SRAVIPGGTC KFDLPSYYAW QQWPAEQRRQ DIAKWIMPLL PLRDAAAIVL RLARESGQAS
KVMAMQGSYQ QMLSGRSYQL MQVRVPPELR VIPEASANKY MLWVRFTMQD GDVRPRAVDI
DVPFHLTLCN L