| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0465 |
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| Symbol | |
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| ID | 6177801 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 521799 |
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| End bp | 522485 |
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| Gene Length | 687 bp |
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| Protein Length | 228 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641680207 |
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| Product | ribulose-phosphate 3-epimerase |
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| Protein accession | YP_001807178 |
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| Protein GI | 172059526 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0036] Pentose-5-phosphate-3-epimerase |
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| TIGRFAM ID | [TIGR01163] ribulose-phosphate 3-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.710301 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACTCAAT TCCGCATCGC TCCCAGCATC CTGTCGGCCG ACTTTGCACG GCTCGGCGAA
GAAGTCCGCA ACGTGGTCGC CGCCGGCGCC GACTGGATTC ACTTCGACGT GATGGACAAC
CATTATGTGC CGAACCTGAC GATCGGCCCG CTCGTGTGCG AGGCGATCCG CCCGCACGTG
CAGGTGCCGA TCGACGTGCA CCTGATGGTG CGCCCGGTCG ACCGGATCGT GCCCGATTTC
GCGAAAGCCG GCGCGAACCT GATCAGCTTC CACCCGGAAG GCTCGGACCA CATCGATCGT
ACGCTGTCGC TGATCCGCGA TCACGGCTGC AAGGCCGGCC TCGTGTTCAA TCCGGCCACG
CCGCTGAACT ACCTCGACCA CGTGATGGAC CGCCTCGACT TCGTGCTGCT GATGTCGGTG
AACCCCGGCT TCGGCGGCCA GTCGTTCATT CCGGAAACGC TGAACAAGCT GCGCGAGGCG
CGTGCCCGCA TCGACGCGTA CACCGAGCGC ACCGGCCGCG AGATCCTGCT CGAGGTGGAC
GGCGGCGTGA AGGCCGACAA CATCGCGGAA ATCGCGGCAG CCGGCGCGGA TACCTTCGTC
GCGGGTTCGG CGATCTTCGG CAAGCCCGAC TACCGCACGG TGATCGACGA GATGCGCGCC
GCGCTCGCTA CCGTCGAGCG GAGCTGA
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| Protein sequence | MTQFRIAPSI LSADFARLGE EVRNVVAAGA DWIHFDVMDN HYVPNLTIGP LVCEAIRPHV
QVPIDVHLMV RPVDRIVPDF AKAGANLISF HPEGSDHIDR TLSLIRDHGC KAGLVFNPAT
PLNYLDHVMD RLDFVLLMSV NPGFGGQSFI PETLNKLREA RARIDAYTER TGREILLEVD
GGVKADNIAE IAAAGADTFV AGSAIFGKPD YRTVIDEMRA ALATVERS
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