Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_0449 |
Symbol | |
ID | 6177898 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | - |
Start bp | 504193 |
End bp | 505110 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641680191 |
Product | LysR family transcriptional regulator |
Protein accession | YP_001807162 |
Protein GI | 172059510 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.038969 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.109175 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCGTT CCCGCCTGCC GCCCCTCAAC GCGCTGCGTG CGTTCGAGGC GGCGGCCCGC CACCTGTCGG TGAAATCCGC GGCGCAAGAG CTGTCGGTCA CGCCCGGCGC GGTGAGCCAG ATGATCCGCA CGCTCGAGCG CCACCTCGGC GTGCAGCTGT TCGAGCGCGT GAACCGCGGC ATCCTGCTGA CCGCCGCGGG CCGCGACTAC CTGCCGCCCG TGCGCAACGC GTTCCGGCAG ATCGCCGACG CGTCGCAGCG CGTGGCGGGG GCCGCCGACA GCGGCGTGCT GACGGTGAGC GTCACGCCGT TTTTCGCGTC CGCATGGCTC GTGCCGCGCC TCGCGCAGTT CCGCGACGCG TGCCCGGACA TCGACCTGCA GATCGCCACG AGCCATGCGC TCGCCGATTT CTCGCGCGAC GGCGTCGACG TCGCGATCCG CCACGGTCTC GGCCGTTACA TCGGCTTGTG CAGCGAACGG CTGCTGACGG TGGAGATCGT CGCGCTTGCG GCACCGGCCC TCGTCGCGCG GCTGGGCATG CCGGCCACGC CCGCCGACCT GGCCCGATGG CCGCATCTGC ACGACGCCGA GCGCAAGGGC TGGCACATCT GGTTCGACGC GCAGCGGATC GACGATTTCG GTCCGCCGCG CGGCCCCGCG TTCGACGATT CCGGCCTGTT GCTGCAGGCG ATTCTCGCCG GCCAGGGCGC GGGCCTGCTG CCGGCGGCGA TGGTGCGCGA CGAGCTCGCG AGCGGCCGGC TCGTGCAGCT TGCCGACATC GCGTGGCTCG ACGACTTCGC GTACTACCTC GTCTATCCGC CGCATCACGC GGAACGCACG AAAGTCGCGG CGTTCCGCCG GTGGATTCTC GAGGCCGCGC AAGCCGACGG CGCGGCATCG ATGACCGGCG CGGCGTAG
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Protein sequence | MNRSRLPPLN ALRAFEAAAR HLSVKSAAQE LSVTPGAVSQ MIRTLERHLG VQLFERVNRG ILLTAAGRDY LPPVRNAFRQ IADASQRVAG AADSGVLTVS VTPFFASAWL VPRLAQFRDA CPDIDLQIAT SHALADFSRD GVDVAIRHGL GRYIGLCSER LLTVEIVALA APALVARLGM PATPADLARW PHLHDAERKG WHIWFDAQRI DDFGPPRGPA FDDSGLLLQA ILAGQGAGLL PAAMVRDELA SGRLVQLADI AWLDDFAYYL VYPPHHAERT KVAAFRRWIL EAAQADGAAS MTGAA
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