| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0440 |
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| Symbol | prfA |
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| ID | 6178401 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 495057 |
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| End bp | 496139 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641680182 |
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| Product | peptide chain release factor 1 |
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| Protein accession | YP_001807153 |
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| Protein GI | 172059501 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0216] Protein chain release factor A |
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| TIGRFAM ID | [TIGR00019] peptide chain release factor 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.518401 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGACGA GCATGCAACG CAAGCTCGAC CAGCTGTCTA CGCGGCTGGC CGAACTGAAC
GACCTGTTGA GCCGCGAAAA CGTCACGGCC GACCTCGACC AGTACCGCAG GCTCACGCGC
GAACACGCGG AACTCGGCCC GGTCGTCGAG CAGTACGCGC TGTGGCGCCA GTCGCGCAAC
GACGAGACGG CCGCACAGGA ACTGCTCGCC GATGCATCGA TGCGCGATTT CGCCGAAGAC
GAAATCCGCA GCGCACGTGA GCGCATGGTC CGTCTCGAAG CCGAATTGCA GAAGATGCTG
CTGCCGAAGG ACCCGAACGA CGACCGCAAC ATCTTCCTCG AAATCCGCGC GGGCGCCGGC
GGCGATGAAT CGGCGCTGTT CGCGGGCGAT CTGCTGCGCA TGTACCTGCG CTTCGCGGAG
CGCCAGCGCT GGCAGGTCGA GATGATGTCG GAAAGCGCGT CGGATCTCGG CGGCTACAAG
GAAGTGATCG TGCGGATCGC CGGCCAGGGC GCGTACTCGC GCCTGAAGTT CGAGTCGGGC
GGCCATCGCG TGCAACGCGT GCCGGCCACT GAAACCCAGG GGCGCATCCA CACGTCCGCA
TGCACGGTCG CGGTGATGCC GGAAGCGGAC GAGATCGGCG AGGTCGAGAT CAATCCGGCC
GACCTGCGGA TCGACACGTT CCGCGCGTCG GGCGCGGGCG GCCAGCACAT CAACAAGACC
GATTCGGCGG TGCGCGTCAC GCACATCCCG ACCGGAATCG TCGTCGAGTG CCAGGACGAC
CGTTCGCAGC ACAAGAACAA GGACCGCGCG CTGAAGGTGC TCGCCGCGCG CATCAAGGAC
AAGCAGTATC ACGAGCAGCA CGCGAAGGAA GCGGCGACGC GCAAGAGCCT GATCGGCTCG
GGCGACCGCT CGGAACGGAT CCGCACGTAC AACTTCCCGC AAGGCCGGAT GACCGACCAC
CGGATCAACC TGACGCTGTA CCGGCTCGAG GCGCTGATGG ACGGCGATCT CGACGAACTG
ATCGGCGCGC TCGTGACCGA GCACCAGGCC GAACTGCTCG CGTCGCTCGG CGACACCGAC
TGA
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| Protein sequence | MKTSMQRKLD QLSTRLAELN DLLSRENVTA DLDQYRRLTR EHAELGPVVE QYALWRQSRN
DETAAQELLA DASMRDFAED EIRSARERMV RLEAELQKML LPKDPNDDRN IFLEIRAGAG
GDESALFAGD LLRMYLRFAE RQRWQVEMMS ESASDLGGYK EVIVRIAGQG AYSRLKFESG
GHRVQRVPAT ETQGRIHTSA CTVAVMPEAD EIGEVEINPA DLRIDTFRAS GAGGQHINKT
DSAVRVTHIP TGIVVECQDD RSQHKNKDRA LKVLAARIKD KQYHEQHAKE AATRKSLIGS
GDRSERIRTY NFPQGRMTDH RINLTLYRLE ALMDGDLDEL IGALVTEHQA ELLASLGDTD
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