| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0407 |
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| Symbol | |
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| ID | 6177691 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 455472 |
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| End bp | 456572 |
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| Gene Length | 1101 bp |
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| Protein Length | 366 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641680149 |
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| Product | type VI secretion protein |
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| Protein accession | YP_001807120 |
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| Protein GI | 172059468 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3520] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03347] type VI secretion protein, VC_A0111 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGCCC CGAACCGGCG AATCGATCCT GGCGTAGTCG ACGCGCTGCT CGACGAGCCG
CACCGCTTCG AATTCTTCCA GGCGGTGCGC GTGCTCGAAG GGCTGTTCGC ACGGCAGGCG
TCCGATGCGC CCGGCGCATG GCGGCAGGGC GACGTCGTCG CGCAGCACAT CGAATTCCGC
AACACGCTGT CGCTCGGCTT TCCGCCGAGC GAGATCGAAG GCGCGCGCTC GTTCCACGAC
GGCGGCGCGC TGCTCGATTC GGGGGATGAA CGCGACGCCG CGCTCGCGGC CGGCGAGCTC
GGTCACGTCG AGCTGACGCC GGCGTTCTTC GGACTGCTCG GCGCTCAGGG CGCGCTGCCG
CTGCACTACA CCGAGCAGAT CGTCGCGCGC GAGCACCTGA AGCGCGACCA CGCGGCGCGC
GCGTTCTTCG ACGTGTTCTC GAACCGCGCG ACCGCGCTGT TCTATGCGGC GTGGAAGAAA
TACCGGCTGC CGTTCCATTA CGAACTCGAT CGCGACGAGC GCTACCTGCC GCTCTTGCTC
GCGATCGCCG GCGTGCCGAG CGACGAGATC CGCGACAACC TCGCGGCCGG CGCGGGAGGC
GTGCTCGACG AGGCCGTCGC CGGCTACGCG CTCGCCGCGC GGCACCGGCC GATGTCGGCC
GCGTACCTGC AGCGCGCGCT GTCCGACTAC TTCCGCGTGC CGGTGAAGAT CGATCAGTTC
GTCGGCAAAT GGTACGACGT GCCGCCCGAC CAGTTGAGCG TGCTCGGCGA GGTCAACGTG
GTGCTCGGCG CGACGGCGCT CGTCGGCGAA CGTGTGTGGC AGCGCGACAT GCGCGCGCGG
ATCGTCGTCG GCCCGCTGTC CAAGCGCGAC TACGAGGCGT TCCTGCCCGG CGGCGCGCAC
GCCGTCGCGC TCGAACGGAT GCTGACGCTG CTCGCCGGCG TCACGCTCGA ATACGAGGTG
AAGCTCGTGC TGAAGCGCAC CGAGGTGGGC GCGAGCGTGC TCGGCGCAGG CTCGCGGCTC
GGCTGGGACG CGTTCCTCTG CACGCGCGAC GCGCTCCACG ACCGCTCGGA CGCCCGCTAC
GAACTGCACG TGATTCACTG A
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| Protein sequence | MQAPNRRIDP GVVDALLDEP HRFEFFQAVR VLEGLFARQA SDAPGAWRQG DVVAQHIEFR
NTLSLGFPPS EIEGARSFHD GGALLDSGDE RDAALAAGEL GHVELTPAFF GLLGAQGALP
LHYTEQIVAR EHLKRDHAAR AFFDVFSNRA TALFYAAWKK YRLPFHYELD RDERYLPLLL
AIAGVPSDEI RDNLAAGAGG VLDEAVAGYA LAARHRPMSA AYLQRALSDY FRVPVKIDQF
VGKWYDVPPD QLSVLGEVNV VLGATALVGE RVWQRDMRAR IVVGPLSKRD YEAFLPGGAH
AVALERMLTL LAGVTLEYEV KLVLKRTEVG ASVLGAGSRL GWDAFLCTRD ALHDRSDARY
ELHVIH
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