| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0405 |
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| Symbol | |
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| ID | 6178174 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 453110 |
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| End bp | 453595 |
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| Gene Length | 486 bp |
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| Protein Length | 161 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641680147 |
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| Product | type VI secretion system lysozyme-related protein |
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| Protein accession | YP_001807118 |
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| Protein GI | 172059466 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3518] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03357] type VI secretion system lysozyme-related protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.00895356 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAACGAT TCGAACCCAG TTTTCTCGAC AAGCTGTTCG ACGACGAACC GCACCTGCCG
GCCTCGGCAG CGATGCGGCA ATTGTCGCTG GACGAGCTCA AGAACACGGT TGCCCGCGAC
GTCGAGGCGA TCCTCAACAC CCGTATCGCG CACACCGAAC TCGAACTGGC GGAGCTGCCG
GAATGCCAGA AGTCGGTGCT GACCTACGGG CTGAACGATT TCGCGGGGCT GAGCCTCGCG
AGTCATTACG ACCGCGCGTT CATCTGCAAG TCGATCCAGC AGGCCATTGC GCGCCATGAG
CCGCGGTTGC AGCAGGTGCA GGTGACGTTC GAGCTGAACG AGCAGTCGAC CAACGCGCTT
TACTTCGCGA TCCAGGCGCT GCTCGTCGTG CATCCGGCCG AGGAGCCGGT GAATTTCGAC
GCGATGCTGC AGCCGTCGAC GCTGCAGTAT TCGGTCACGC GCACACGCGC GGCAAGAATG
CTGTGA
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| Protein sequence | MKRFEPSFLD KLFDDEPHLP ASAAMRQLSL DELKNTVARD VEAILNTRIA HTELELAELP
ECQKSVLTYG LNDFAGLSLA SHYDRAFICK SIQQAIARHE PRLQQVQVTF ELNEQSTNAL
YFAIQALLVV HPAEEPVNFD AMLQPSTLQY SVTRTRAARM L
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