| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0403 |
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| Symbol | |
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| ID | 6178478 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 450983 |
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| End bp | 452473 |
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| Gene Length | 1491 bp |
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| Protein Length | 496 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641680145 |
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| Product | EvpB family type VI secretion protein |
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| Protein accession | YP_001807116 |
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| Protein GI | 172059464 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3517] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03355] type VI secretion protein, EvpB/VC_A0108 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00000570497 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCAGC AAACGGCTGC GGCCCAAGCG AGCGGCGCGG AATACGCCGC CGGGACTTCG
TTGCTCGACG ACATCGTCGA GAAGAGCAAG GTCGCGAAAT CCGATTCCGA GCATGCGCGT
GCGAAGGACC TGATCGGCGA ACTCGTGCAC CAGGTGCTCG ACGGTACTGT GATCGTGTCG
GACAACCTGT CGGCGACGAT CGACGCGCGC GTCGCGGAGC TCGACCGCCT GATCTCCACG
CAGCTCTCCG CGGTGATGCA TGCGCCGGAA TTCCAGCGCC TGGAAAGCAC GTGGCGCGGG
ATGGACTACC TGGTCAAGGA AAGCAACACG GGCCAGACGA TCAAGATCAA GGCGCTGCAC
GCCCCGAAGC GCGACCTCGT GCGCGACTTC AAGGGCGCGA GCGAGTTCGA CCAGAGCGCG
CTGTTCAAGA AGGTCTACGA AGAAGAGTTC GGCACGTTCG GCGGCTCGCC GTTCGGTGCG
CTGATCGGCG ACTACGAGAT CTCGCGCCAG CCGGAAGACA TGTACTTCAT CGAGCAGATG
TCGCACGTCG CGGCGGCCGC GCATGCGCCG TTCATCGCGT CGGCGTCGCC GGAGCTGCTC
GGCCTCGAGT CGTTCTCCGA CCTCGGCAAG CCGCGCGATC TCGGCAAGGT GTTCGACACG
GTCGAATACG CGAAGTGGAA GTCGTTCCGC GATTCCGAGG ATTCGCGCTA CGTCGGCCTC
ACGCTGCCGC GCTTCCTCGG CCGCCTGCCG TTCAATCCGA AGGACGGCCA GACCGCGGAG
AACTTCAACT TCGTCGAGGA TGTGGACGGC ACCGAGCACG ACAAGTACCT GTGGTGCAAC
GCGGCGTGGG CGTTCGCGGC ACGCCTGACC GCCGCGTTCG ACGACTTCGG CTGGTGCGCG
GCGATCCGCG GCGTCGAAGG CGGTGGCCTC GTCGAGGATC TGCCGACCCA CACGTTCAAG
ACCGACGACG GTGAAGTCGC GCTGAAGTGC CCGACCGAAA TCGCGATCAC CGATCGCCGC
GAGAAGGAGC TGAGCGACCT CGGCTTCATC CCGCTCGTTC ATTGCAAGAA CTCGGATTAC
GCTGCGTTCT TCGCCGCGCA ATCGGTGCAG AAACCGAAAA AATACAGCAC CGACAGCGCG
AATGCGAATG CCGTCCTGTC CGCCCAGCTT CAGTACATCT TCTCGGTATC GCGCGTCGCG
CACTACCTGA AGGCGATGAT GCGGGACAAG ATCGGCAGCT TCGCATCGGC GCAGAACGTG
GAGACTTTCC TCAACCGGTG GATTTCGCAG TACGTCCTGC TCGACGACAA CGCATCGCAG
GAACAGAAGG CGCAATTCCC GCTGCGCGAG GCATCCATAC AAGTGTCAGA GATTCCGGGG
AAGCCGGGCT CGTATCGTTC GGTCGCGTTC CTGCGCCCGC ACTTTCAGCT CGACGAACTC
TCGATTTCTC TGCGACTTGT CGCTGATCTG CCCAAACCGG CAAATTCATA A
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| Protein sequence | MNQQTAAAQA SGAEYAAGTS LLDDIVEKSK VAKSDSEHAR AKDLIGELVH QVLDGTVIVS
DNLSATIDAR VAELDRLIST QLSAVMHAPE FQRLESTWRG MDYLVKESNT GQTIKIKALH
APKRDLVRDF KGASEFDQSA LFKKVYEEEF GTFGGSPFGA LIGDYEISRQ PEDMYFIEQM
SHVAAAAHAP FIASASPELL GLESFSDLGK PRDLGKVFDT VEYAKWKSFR DSEDSRYVGL
TLPRFLGRLP FNPKDGQTAE NFNFVEDVDG TEHDKYLWCN AAWAFAARLT AAFDDFGWCA
AIRGVEGGGL VEDLPTHTFK TDDGEVALKC PTEIAITDRR EKELSDLGFI PLVHCKNSDY
AAFFAAQSVQ KPKKYSTDSA NANAVLSAQL QYIFSVSRVA HYLKAMMRDK IGSFASAQNV
ETFLNRWISQ YVLLDDNASQ EQKAQFPLRE ASIQVSEIPG KPGSYRSVAF LRPHFQLDEL
SISLRLVADL PKPANS
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