Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_0336 |
Symbol | |
ID | 6177557 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | - |
Start bp | 381074 |
End bp | 382843 |
Gene Length | 1770 bp |
Protein Length | 589 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641680081 |
Product | ABC transporter |
Protein accession | YP_001807053 |
Protein GI | 172059401 |
COG category | [R] General function prediction only |
COG ID | [COG4178] ABC-type uncharacterized transport system, permease and ATPase components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.294433 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.265185 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCAAT CGATCGATCC CGTCCGCTCC GCCTCAGACG CGCCGCAGGA CGAGCGCCCG GTATCCGCAT GGAGCCTCAT CAAGCCCTAC TGGGTGTCGT CCGAATGGAA AACCGCGTGG GGACTGCTCG TCACGATCAT CGTGATCAAT CTCTGCGTCG TCTGGATCAA CGTCAAGCTG AACAAGTGGA ACGCGCAGTT CTACAACGCG CTGCAGTCGA AGGACGTCCA CGACTTCCCG AACCTGCTGA TGCAGTTCTC GGCACTCGCG TTCGGCTTCA TCATCCTCGC GGTGTACGGC CGCTACCTGC GACAGATGCT CGGGTTCCGC TGGCGCCAGT GGCTCACCGA CCGCTTTCTC GGCCAGTGGC TCGGCGATCG CGCGTTCTAC CGGATCGAGC GCGACCGCCT CGCCGACAAC CCCGACCAGC GGATCACCGA CGACCTCCAG TCGTTCGCGA CGACGACGCT CGCGCTGTCG CTCGACCTGC TGTCGACGGT CGTCACGCTC GTGTCGTTCA TCACGATCCT GTGGTCGCTC GCCGGCGCGC TGACGCTCTC GCTCGGCGCG ACGCCGATCA CGATCCCCGG CTACATGGTG TGGGCGGCCG CGCTGTACGC GGTGGTCGGC TCGCTGATCA TCCAGAAGGT CGGCCACCCG CTCGTGTCGA TCAACTACCA GCAGCAGCGC GTCGAGGCCG ATTTCCGCTT CGGGCTGATC CGCGTGCGCG AGAACGCCGA GCAGATCGCG TTCTACGACG GCGAGAAAAC CGAGACCCGC AACGCGCAGA GCCTGTTCAT GCGCATTCGC GACAACTGGT GGCGCGTGAT GAAGTACACG AAGCGCCTCA CGTTCGTGCT GAGCTTCTAC GGGCAGATCG CGATCATCTT CCCGCTCGTC GTCGCCGCGC CGCGCTATTT CGCGGGCGCG TTCTCGTTCG GCGTGCTGAT GCAGATCTCG TCCGCGTTCG GCACCGTCAG CGATTCGTTC TCGTGGTTCA TCAACAGTTA CTCGACCCTC GTCGAATGGC GCGCGACCGT CAACCGTCTG CGTGAATTCA AGCGCGTGAT GGGCACGTCG CACCTGAAGG AAAGCCTGTC GCCGGCAACC GAGCACGGCG GCATCAACCT GCACTACGTC GATGCCGCGA AGCTGTCCAC ATCGTCGCTG AAGCTCGCGC TGCCGAACGG CACCGCGCTC GCGAACATCG GCAACCTGAC GATCGAACCC GGCTCGCGCT GGCTCGTGAT CGGCAAGTCG GGTTCCGGCA AGAGCACGTT CATGCGTGCG CTCGCGGGCC TGTGGCCGTT CGGCGACGGC GCGATCGACG CGCCGGTCGG CGCGCGAATG ATGTTCGTGC CACAGACGAG CTACTTGCCG ATCGGCACGC TGAAGGCCGC GCTCACCTAT CCGGCGCCGC CCGACGCGTT CACCGACGAT GCATGCCGCG ACGCGCTGCG CGCGTGCCAC CTCGAAGACT ACGTCGGGCG CCTCGACGAG ACCGGCCACT GGACGCGCGT GCTGTCGCCC GGCGAACAGC AGCGTCTCGC CGGCGCGCGC GTGCTGCTGC ACAAGCCGGA CTTCCTGTTC CTCGACGAAG CGACGAGCGC GCTCGACGCG GACAACGAAG CACGGCTGTA TCACCTGTTC GCCGAACGGC TGCCGAAGGC CGCGATCGTC AGCATCGCCC ACCGCGAATC GCTGGCCGCG TTCCACGTCG GCATGATCAA CGTCGAGCGC GTGACCGACA CCGACAAGGT CGCCGCTTAA
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Protein sequence | MTQSIDPVRS ASDAPQDERP VSAWSLIKPY WVSSEWKTAW GLLVTIIVIN LCVVWINVKL NKWNAQFYNA LQSKDVHDFP NLLMQFSALA FGFIILAVYG RYLRQMLGFR WRQWLTDRFL GQWLGDRAFY RIERDRLADN PDQRITDDLQ SFATTTLALS LDLLSTVVTL VSFITILWSL AGALTLSLGA TPITIPGYMV WAAALYAVVG SLIIQKVGHP LVSINYQQQR VEADFRFGLI RVRENAEQIA FYDGEKTETR NAQSLFMRIR DNWWRVMKYT KRLTFVLSFY GQIAIIFPLV VAAPRYFAGA FSFGVLMQIS SAFGTVSDSF SWFINSYSTL VEWRATVNRL REFKRVMGTS HLKESLSPAT EHGGINLHYV DAAKLSTSSL KLALPNGTAL ANIGNLTIEP GSRWLVIGKS GSGKSTFMRA LAGLWPFGDG AIDAPVGARM MFVPQTSYLP IGTLKAALTY PAPPDAFTDD ACRDALRACH LEDYVGRLDE TGHWTRVLSP GEQQRLAGAR VLLHKPDFLF LDEATSALDA DNEARLYHLF AERLPKAAIV SIAHRESLAA FHVGMINVER VTDTDKVAA
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