Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_0328 |
Symbol | |
ID | 6175992 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | - |
Start bp | 368590 |
End bp | 369321 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641680073 |
Product | OmpW family protein |
Protein accession | YP_001807045 |
Protein GI | 172059393 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3047] Outer membrane protein W |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.73763 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGAA AACTGGCCAT TACGGGGGCC GCAGCGCTCG CATTCGCATT TGCGGGCGGC CCGGCACACG CACAATCCGC AGGTGACTTC TACGTCAGCA CCGGCTGGCT GCACCTGTCA CCGCAGGACA GCAGCGACCC GCTGTTCGTC TACCGCGTCG GCGGCACGCC CATCAACCAA TCGATTCCCA ACACGGGCGC CGGCATCAAC GACGCCGATA CGCTCGGGCT CGCCGCGGGC TACTTCGTTA CCGACCACAT CTCCACCGAG CTCGTCATGG GGATACCGCC GAAGTTCGAC ATCACCGGCA AGGGTCGGTT CGAAAACTTC GGCGTACTCG GCCGTGCGTA CCAGTGGAGC CCCGCCCTGT TGCTTCGCTA CCACTTCAAC GACGCCAACG CGAAGTTCCG TCCGTATCTC GGCGTCGGCG CGACGTATGT CTGGTTCACC GGCGCCAAGA TCACGAACAG CAGCTTCGAG AACGGCGTGC TCGGCGGCCC GACCAGCGCC ACGACCAGCA ACCAGTGGGC GCCCGTGCTC AACGCCGGCT TCACGTACAA CTTCACGAAA CACTGGTTCG GGGGCCTGTC GATCTCGTAC ATCCCGGTCA GCGTGACCGC CACCTTCACG ACGGCCCGCC GCACGCCGGT CGGCACCCTG ACCGAAACGT CGAAAGCGAA GATCTCGCTG AACCCGATCG TCACGTACCT GAACGTCGGC TACCGCTTCT AA
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Protein sequence | MKRKLAITGA AALAFAFAGG PAHAQSAGDF YVSTGWLHLS PQDSSDPLFV YRVGGTPINQ SIPNTGAGIN DADTLGLAAG YFVTDHISTE LVMGIPPKFD ITGKGRFENF GVLGRAYQWS PALLLRYHFN DANAKFRPYL GVGATYVWFT GAKITNSSFE NGVLGGPTSA TTSNQWAPVL NAGFTYNFTK HWFGGLSISY IPVSVTATFT TARRTPVGTL TETSKAKISL NPIVTYLNVG YRF
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