Gene BamMC406_0328 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_0328 
Symbol 
ID6175992 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp368590 
End bp369321 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content64% 
IMG OID641680073 
ProductOmpW family protein 
Protein accessionYP_001807045 
Protein GI172059393 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG3047] Outer membrane protein W 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.73763 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGAA AACTGGCCAT TACGGGGGCC GCAGCGCTCG CATTCGCATT TGCGGGCGGC 
CCGGCACACG CACAATCCGC AGGTGACTTC TACGTCAGCA CCGGCTGGCT GCACCTGTCA
CCGCAGGACA GCAGCGACCC GCTGTTCGTC TACCGCGTCG GCGGCACGCC CATCAACCAA
TCGATTCCCA ACACGGGCGC CGGCATCAAC GACGCCGATA CGCTCGGGCT CGCCGCGGGC
TACTTCGTTA CCGACCACAT CTCCACCGAG CTCGTCATGG GGATACCGCC GAAGTTCGAC
ATCACCGGCA AGGGTCGGTT CGAAAACTTC GGCGTACTCG GCCGTGCGTA CCAGTGGAGC
CCCGCCCTGT TGCTTCGCTA CCACTTCAAC GACGCCAACG CGAAGTTCCG TCCGTATCTC
GGCGTCGGCG CGACGTATGT CTGGTTCACC GGCGCCAAGA TCACGAACAG CAGCTTCGAG
AACGGCGTGC TCGGCGGCCC GACCAGCGCC ACGACCAGCA ACCAGTGGGC GCCCGTGCTC
AACGCCGGCT TCACGTACAA CTTCACGAAA CACTGGTTCG GGGGCCTGTC GATCTCGTAC
ATCCCGGTCA GCGTGACCGC CACCTTCACG ACGGCCCGCC GCACGCCGGT CGGCACCCTG
ACCGAAACGT CGAAAGCGAA GATCTCGCTG AACCCGATCG TCACGTACCT GAACGTCGGC
TACCGCTTCT AA
 
Protein sequence
MKRKLAITGA AALAFAFAGG PAHAQSAGDF YVSTGWLHLS PQDSSDPLFV YRVGGTPINQ 
SIPNTGAGIN DADTLGLAAG YFVTDHISTE LVMGIPPKFD ITGKGRFENF GVLGRAYQWS
PALLLRYHFN DANAKFRPYL GVGATYVWFT GAKITNSSFE NGVLGGPTSA TTSNQWAPVL
NAGFTYNFTK HWFGGLSISY IPVSVTATFT TARRTPVGTL TETSKAKISL NPIVTYLNVG
YRF