| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0327 |
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| Symbol | ugpQ |
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| ID | 6178260 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 367661 |
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| End bp | 368425 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641680072 |
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| Product | cytoplasmic glycerophosphodiester phosphodiesterase |
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| Protein accession | YP_001807044 |
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| Protein GI | 172059392 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0584] Glycerophosphoryl diester phosphodiesterase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.749062 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACTTCCC GTACCGACTG GCCCTATCCG CGCGTGGTCG CCCATCGCGG CGGCGGCACG
CTTGCGCCGG AGAACACCCT CGCCGCGCTC GACGAGGGCG CGCGGCGCGG GCACCGGATG
GTCGAGTTCG ACGCGAAGCT GTCCGCCGAC GACGTGACGT TCCTGCTGCA CGACGACACG
GTCGAGCGCA CGTCGAACGG CAGCGGGCCG GCGGCGGGCA TGCGTTATGC GGCGCTGGCC
GCGCTCGACG CCGGTGCGTG GTTCGACGCG CGCTTCGCGG GCGAGCGGAT GCCGACGCTC
GAGGCGGCGG CGGCGCGCTG TATCGCGCAC GGGCTGGCCG CGAATGTCGA GATCAAGCCA
TGCCCGGGGC GCGAGCGCGA AACCGGGCAG TGCGTGGCGG CCGACGCTGC TGCGTACTGG
CGCGATGCCG CGGTGCCGCC GCTGCTTTCG TCGTTTTCGT TCGATGCGCT GCAACAGGCG
CGCGCGACCG CGCCGGCGCT GCCGCGCGGA ATGCTCTACG AAACCGTGCC GGACGACTGG
CACGCGCAGG TCGTCGGGGC GCTCGGCTGC GTTTCGTTGC ATGCCGACCA CACACGGCTC
GACGAATCGC TCGTGCGGGC GATCAAGGCG GCCGGGCTGC GCATCCTGGT CTACACGGTC
AACGACCTCG CCCGGGCGCG CGAACTCGTG CGCTGGGGCG TCGACGCGGT CTGCACGGAC
CGGATCGACC TGATCGGCCC GACGGCACTC GACGACGTCA TATAG
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| Protein sequence | MTSRTDWPYP RVVAHRGGGT LAPENTLAAL DEGARRGHRM VEFDAKLSAD DVTFLLHDDT
VERTSNGSGP AAGMRYAALA ALDAGAWFDA RFAGERMPTL EAAAARCIAH GLAANVEIKP
CPGRERETGQ CVAADAAAYW RDAAVPPLLS SFSFDALQQA RATAPALPRG MLYETVPDDW
HAQVVGALGC VSLHADHTRL DESLVRAIKA AGLRILVYTV NDLARARELV RWGVDAVCTD
RIDLIGPTAL DDVI
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