Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_0308 |
Symbol | |
ID | 6177546 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 346695 |
End bp | 347348 |
Gene Length | 654 bp |
Protein Length | 217 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641680053 |
Product | cytochrome c class I |
Protein accession | YP_001807025 |
Protein GI | 172059373 |
COG category | [C] Energy production and conversion |
COG ID | [COG2863] Cytochrome c553 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.618372 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.165447 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATCGAC TGTGCAAGTC TCTGATGGTG CTTCAGGTTG CAGCAGGGTT CGTAGGTTTC GTAGCGGAGG CAAACGCGGC GGATGCGGCA AAGCCGGATC TGGACCGCGG CAAGGCGATT GCCGGGCAGG TGTGTGCGTC GTGTCACGGC GCCGACGGCA ACAGCGCGTC GGGCAGTTTC CCGAAGCTCG CCGGCCAGCA TCCCGAATAT CTGGTCAAGC AGTTGAACGA CTTCAAGACC CAGTCGGGCG CCAAGGGGCC GGCGCGGACA AATCCAGTGA TGGTCGGGTT CGCGAGCGCG TTGAGTGCGG ACGACATGCG CAACGTCGCC GCGTATTACG GCTCGCAGGC AACGAAGCTC GGCACCGCCC GCGATGCGGC GACCGTGCCG ATCGGCCAGA AGATCTATCG CGGCGGCATC GCGGAAAAGG GTGTCCCCGC CTGCGCGAGC TGTCACGGGC CGACGGGGCA GGGGCTGCCG GTCCAGTACC CGCGTCTGTC GGGGCAGTGG GCCGATTACA CGGTTGCCCA GTTGACCGCG TTCCAGCAGG GTGCCGGCGC GCGTAACAAC AACGAGGCGA TGCATCAGAT CGCATCGCGT CTGTCGGACA ACGAGATCAA GGCCGTCGCG GATTACATCG CGGGCCTGCG TTGA
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Protein sequence | MNRLCKSLMV LQVAAGFVGF VAEANAADAA KPDLDRGKAI AGQVCASCHG ADGNSASGSF PKLAGQHPEY LVKQLNDFKT QSGAKGPART NPVMVGFASA LSADDMRNVA AYYGSQATKL GTARDAATVP IGQKIYRGGI AEKGVPACAS CHGPTGQGLP VQYPRLSGQW ADYTVAQLTA FQQGAGARNN NEAMHQIASR LSDNEIKAVA DYIAGLR
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