| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0292 |
|---|
| Symbol | rplR |
|---|
| ID | 6176250 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010551 |
|---|
| Strand | + |
|---|
| Start bp | 335538 |
|---|
| End bp | 335903 |
|---|
| Gene Length | 366 bp |
|---|
| Protein Length | 121 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641680037 |
|---|
| Product | 50S ribosomal protein L18 |
|---|
| Protein accession | YP_001807009 |
|---|
| Protein GI | 172059357 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0256] Ribosomal protein L18 |
|---|
| TIGRFAM ID | [TIGR00060] ribosomal protein L18, bacterial type |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.000000486203 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.0384566 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATAAGA CTCAATCTCG CCTGCGCCGC GCTCGCCAGA CGCGTATCAA GATCGCTGAG
CTGCAGGTCG CGCGTCTCGC CGTGCATCGC ACGAACACGC ACATCTACGC TCAAGTGTTC
TCGCCGTGCG GCACCAAGGT GCTCGCCAGC GCGTCGACGC TCGAAGCAGA AGTGCGCGCC
GAACTGGCCG ACAAGTCGGG CAAGGGTGGC AACGTTAATG CTGCGACGCT GATCGGCAAG
CGTATTGCCG AGAAGGCAAA GGCCGCCGGC ATCGAATCCG TCGCCTTCGA CCGCTCGGGC
TTCCGCTACC ATGGCCGCGT CAAGGCGCTG GCTGAGGCAG CTCGCGAAGC TGGGCTCAAG
TTCTAA
|
|---|
| Protein sequence | MDKTQSRLRR ARQTRIKIAE LQVARLAVHR TNTHIYAQVF SPCGTKVLAS ASTLEAEVRA
ELADKSGKGG NVNAATLIGK RIAEKAKAAG IESVAFDRSG FRYHGRVKAL AEAAREAGLK
F
|
|---|
| |