Gene BamMC406_0291 details

Gene Information

• Locus tag: BamMC406_0291
• Symbol: rplF
• ID: 6177541
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia ambifaria MC40-6
• Kingdom: Bacteria
• Replicon accession: NC_010551
• Strand: +
• Start bp: 334995
• End bp: 335525
• Gene Length: 531 bp
• Protein Length: 176 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 641680036
• Product: 50S ribosomal protein L6
• Protein accession: YP_001807008
• Protein GI: 172059356
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0097] Ribosomal protein L6P/L9E
• TIGRFAM ID: [TIGR03654] ribosomal protein L6, bacterial type

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.000000875703
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: 14
• Fosmid unclonability p-value: 0.0218003
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGTCTCGAG TAGGTAAAAG CCCGATCGCG CTGCAAGGCG CGGAAGTCAA GCTGGCCGAC 
GGTGCAATCA CCGTCAAGGG CCCGCTGGGC ACCATCACGC AAGCGATCAA TCCGCTCGTG 
AACGTGGCGA ACAACGACGG CACGCTGAAT CTGTCGCCGG TCGACGAAAG CCGCGAAGCA 
AATGCACTGT CGGGCACGAT GCGCGCGATC ATCGCGAATG CCGTGCACGG CGTGACCAAG 
GGTTTCGAGC GCAAGCTGAC GCTGGTTGGC GTCGGTTATC GTGCGCAGGC GCAAGGCGAC 
AAGCTGAACC TGTCGCTGGG TTTCTCGCAC CCGGTGGTGC ACCAGATGCC GGAAGGCGTC 
AAGGCTGAAA CCCCGACGCA AACCGAAATC GTGATCAAGG GGATCAACAA GCAACAAGTC 
GGTCAAGTAG CTGCGGAAGT TCGCGGTTAC CGTCCGCCGG AGCCCTACAA GGGCAAGGGC 
GTGCGCTATT CCGACGAGGT TGTGATCCTC AAAGAAACGA AGAAGAAGTA A 

 

Protein sequence

MSRVGKSPIA LQGAEVKLAD GAITVKGPLG TITQAINPLV NVANNDGTLN LSPVDESREA 
NALSGTMRAI IANAVHGVTK GFERKLTLVG VGYRAQAQGD KLNLSLGFSH PVVHQMPEGV 
KAETPTQTEI VIKGINKQQV GQVAAEVRGY RPPEPYKGKG VRYSDEVVIL KETKKK