| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0285 |
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| Symbol | rpsQ |
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| ID | 6176239 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 332428 |
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| End bp | 332700 |
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| Gene Length | 273 bp |
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| Protein Length | 90 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 641680030 |
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| Product | 30S ribosomal protein S17 |
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| Protein accession | YP_001807002 |
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| Protein GI | 172059350 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0186] Ribosomal protein S17 |
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| TIGRFAM ID | [TIGR03635] 30S ribosomal protein S17 |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.00000000405514 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.0233018 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACGATA GCGTGAAAAC CTCGCTGAAG CGGACGCTGG TCGGTCGGGT CGTCAGCAAC
AAGATGGACA AGACCGTCAC CGTGCTGATC GAGCACCGCG TCAAGCACCC GATCTACGGC
AAGTATGTCG TGCGCTCGAA GAAGTACCAC GCGCATGATG AAGCGAACAC CTGCAACGAA
GGCGATCTCG TCGAAATCCA GGAAACCCGT CCTGTTTCGA AGACGAAGGC CTGGACGGTG
TCGCGCCTCG TCGAAGCGGC TCGCGTGATC TAA
|
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| Protein sequence | MNDSVKTSLK RTLVGRVVSN KMDKTVTVLI EHRVKHPIYG KYVVRSKKYH AHDEANTCNE
GDLVEIQETR PVSKTKAWTV SRLVEAARVI
|
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