Gene BamMC406_0273 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_0273 
Symbol 
ID6176364 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp323849 
End bp325951 
Gene Length2103 bp 
Protein Length700 aa 
Translation table11 
GC content61% 
IMG OID641680018 
Productelongation factor G 
Protein accessionYP_001806990 
Protein GI172059338 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0480] Translation elongation factors (GTPases) 
TIGRFAM ID[TIGR00484] translation elongation factor EF-G
[TIGR00231] small GTP-binding protein domain 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0823209 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.369004 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCTCGCA AGACTCCTAT CGAGCGCTAC CGAAATATCG GTATTAGCGC TCACATCGAC 
GCCGGCAAAA CGACGACGAC CGAGCGCATT CTGTTTTACA CCGGTGTGAA CCACAAGATC
GGTGAAGTCC ACGACGGCGC AGCCACGATG GACTGGATGG AGCAGGAACA GGAGCGTGGC
ATCACGATCA CGTCCGCTGC TACCACGGCC TTCTGGAAGG GCATGGGCGG CAACTATCCG
GAACACCGCA TCAACATCAT CGACACCCCG GGTCACGTCG ACTTCACGAT CGAAGTGGAG
CGCTCGATGC GCGTGCTCGA CGGCGCGTGC ATGGTGTACT GCGCAGTGGG CGGCGTGCAG
CCGCAGTCGG AAACGGTGTG GCGCCAGGCC AACAAGTACA AGGTTCCCCG TCTCGCGTTC
GTCAACAAGA TGGACCGTAC CGGCGCGAAC TTCTTCAAGG TCTACGACCA GCTCCGTCTG
CGCCTGAAGG CGAACCCGGT TCCGGTCGTG GTGCCGATCG GCTCGGAAGA AAACTTCAAG
GGCGTGGTCG ACCTGATCAA GATGAAGGCG ATCATTTGGG ACGAAGCGTC CCAAGGCACG
AAGTTCGACT ACGTCGACAT CCCGGCAGAG CTCGCCGAGA CCTGCAAGGA ATGGCGCGAA
AAGATGGTCG AAGTGGCTGC TGAAGCCAAC GAAGACCTGA TGAACAAGTA CCTGGAAGAA
GGCGATCTGC CGGAAGCCGA CATCGTCAAG GCGCTGCGCG ACCGTACGAT CGCGTGCGAA
ATCCAGCCGA TGCTGTGCGG TACCGCGTTC AAGAACAAGG GCGTGCAGCG TATGCTCGAC
GCCGTGATCG ACTTCCTGCC GTCGCCGGTC GACATCCCGC CGGTCAAGGG CGAGCTCGAA
AACGGCGAAG CAGCGGAGCG CAAGGCGTCG GACGACGAGA AGTTCTCGTC GCTCGCGTTC
AAGATCATGA CCGACCCGTT CGTCGGCCAG CTGATCTTCT TCCGTGTGTA CTCGGGCGTC
GTCAATTCGG GCGACACGCT GCTGAACTCG ACCAAGGGCA AGAAGGAGCG CCTCGGCCGT
ATTCTGCAGA TGCACGCGAA CCAGCGTGAA GAAATCAAGG AAGTCCGTGC GGGCGACATC
GCCGCTGCGG TCGGCCTGAA GGAAGCGACC ACGGGCGACA CGCTGTGCGA TCCGGCAAAC
CCGATCGTTC TCGAGCGCAT GGTGTTCCCG GAGCCGGTGA TTTCGCAGGC TGTCGAGCCG
AAGACCAAGG CTGACCAGGA AAAGATGGGC CTCGCGCTGA ACCGCCTGGC GCAGGAAGAC
CCGTCGTTCC GCGTGCAGAC CGACGAAGAG TCGGGCCAGA CCATCATTTC GGGCATGGGC
GAGCTCCACC TCGAAATTCT GGTCGACCGG ATGAAGCGTG AATTCGGCGT GGAAGCGACC
GTCGGCAAGC CGCAGGTTGC ATACCGCGAA ACGATCCGTT CGACGGCGAA GGACGTCGAC
GGCAAGTTCG TCAAGCAGTC GGGTGGTCGC GGCCAGTACG GTCACGCGGT CATCACGCTC
GAGCCGAACG AGCAGGGCAA GGGCTACGAG TTCTTCGACG AGATCAAGGG TGGTGTGATT
CCGCGTGAAT ACATCCCGGC GGTCGACAAG GGTATCCAGG ACACGCTGAA GTCGGGCGTG
CTGGCTGGCT TCCCGGTCGT CGACGTGAAG GTTCACCTGA CGTTCGGTTC CTACCACGAC
GTTGACTCGA ACGAAAATGC GTTCCGCATG GCCGGTTCGA TGGCGTTCAA GGAAGCGATG
CGCAAGGCGA ACCCGGTCGT CCTCGAGCCG ATGATGGCTG TCGAAGTCGA GACGCCGGAA
GACTACATGG GCAACGTCAT GGGCGACCTG TCGGGTCGTC GCGGCATCGT CCAGGGCATG
GAAGACATGG TTGGCGGCGG CAAGATCGTT CGCGCCGAAG TGCCGCTGTC GGAAATGTTC
GGTTACTCGA CGTCGCTGCG TTCGCTGACG CAAGGTCGTG CAACGTACAC GATGGAGTTC
AAGCACTACG CTGAAGCTCC GCGCAACGTT GCTGAAGCGA TCATCAGCGC GAAGTCGAAG
TAA
 
Protein sequence
MARKTPIERY RNIGISAHID AGKTTTTERI LFYTGVNHKI GEVHDGAATM DWMEQEQERG 
ITITSAATTA FWKGMGGNYP EHRINIIDTP GHVDFTIEVE RSMRVLDGAC MVYCAVGGVQ
PQSETVWRQA NKYKVPRLAF VNKMDRTGAN FFKVYDQLRL RLKANPVPVV VPIGSEENFK
GVVDLIKMKA IIWDEASQGT KFDYVDIPAE LAETCKEWRE KMVEVAAEAN EDLMNKYLEE
GDLPEADIVK ALRDRTIACE IQPMLCGTAF KNKGVQRMLD AVIDFLPSPV DIPPVKGELE
NGEAAERKAS DDEKFSSLAF KIMTDPFVGQ LIFFRVYSGV VNSGDTLLNS TKGKKERLGR
ILQMHANQRE EIKEVRAGDI AAAVGLKEAT TGDTLCDPAN PIVLERMVFP EPVISQAVEP
KTKADQEKMG LALNRLAQED PSFRVQTDEE SGQTIISGMG ELHLEILVDR MKREFGVEAT
VGKPQVAYRE TIRSTAKDVD GKFVKQSGGR GQYGHAVITL EPNEQGKGYE FFDEIKGGVI
PREYIPAVDK GIQDTLKSGV LAGFPVVDVK VHLTFGSYHD VDSNENAFRM AGSMAFKEAM
RKANPVVLEP MMAVEVETPE DYMGNVMGDL SGRRGIVQGM EDMVGGGKIV RAEVPLSEMF
GYSTSLRSLT QGRATYTMEF KHYAEAPRNV AEAIISAKSK