| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0271 |
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| Symbol | rpsL |
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| ID | 6177912 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 322702 |
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| End bp | 323082 |
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| Gene Length | 381 bp |
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| Protein Length | 126 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641680016 |
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| Product | 30S ribosomal protein S12 |
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| Protein accession | YP_001806988 |
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| Protein GI | 172059336 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0048] Ribosomal protein S12 |
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| TIGRFAM ID | [TIGR00981] ribosomal protein S12, bacterial/organelle |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.635943 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCAACCA TCAACCAACT GGTTCGCAAA GGCCGTCAGT CGGAAACGAC GAAGAGCAAG
AGCCCGGCCC TGCAGGACTG CCCCCAGCGT CGCGGCGTGT GCACCCGTGT GTACACGACG
ACGCCGAAGA AGCCGAACTC GGCACTCCGT AAGGTTGCCA AGGTTCGTCT GACGAACGGC
TTCGAAGTGA TTTCGTACAT CGGCGGTGAA GGCCACAACC TGCAGGAACA CTCGGTTGTG
CTGATCCGCG GCGGCCGTGT GAAGGACTTG CCGGGTGTGC GTTACCACAT GGTTCGCGGC
TCGCTGGATA CCCAGGGCGT CAAGGACCGT AAGCAAGCGC GCTCGAAGTA CGGCGCGAAG
CGTGCAAAGG CTGCCAAGTA A
|
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| Protein sequence | MPTINQLVRK GRQSETTKSK SPALQDCPQR RGVCTRVYTT TPKKPNSALR KVAKVRLTNG
FEVISYIGGE GHNLQEHSVV LIRGGRVKDL PGVRYHMVRG SLDTQGVKDR KQARSKYGAK
RAKAAK
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