Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_0238 |
Symbol | |
ID | 6177717 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | - |
Start bp | 273296 |
End bp | 274129 |
Gene Length | 834 bp |
Protein Length | 277 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641679974 |
Product | OmpW family protein |
Protein accession | YP_001806955 |
Protein GI | 172059303 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3047] Outer membrane protein W |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000000689668 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 0 |
Fosmid unclonability p-value | 0.0000000000300165 |
Fosmid Hitchhiker | No |
Fosmid clonability | unclonable |
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Sequence |
Gene sequence | ATGAAGAAGA CCCTCCTCTG CGCGGCGGCC GGTGCCGCCG CCCTGGCGCC ACTCGCGGCG CACGCGCAGA GCGCCGGCAG CAACGTCGTC ACGCTGGGCT GGTTCCACAT CATGCCGCAG CAGAGCAGCA CGCCGATGAC GACCAACGTC GCCCCGACGC CGATCAACAC GCCGCTGCGG CTGCCGCCGT CGTTCACGTC GCCGGGCACC GGGCTGCACA CGAGCGGCGC GGATACCGTC GGCCTGACGG TCAGTCACTT CCTGACCGAT CACATCGCGG TCACGTCGGT GGCCGGCGTA CCGCCGGTGT TCAAGGTATC GGGCCAGGGG ACGATCCGGC CGCCAGGCCC GGCCGGCGCG CTCGGCACGC AGAACATCGG GCTCGGGTCG GTGAATCCGA TCGTGAAGAG CGTGCGGCAG TGGAGCCCGG CGGTAATCCT GCAGTACTAC TTCGCGCAGG CGAACGCGAA GTTCCGGCCG TTCCTCGGCC TAGGCGTGTC GTACAACTGG TTCAGCGACC TGCAGCTCAA CACGAACTTC ATCAAGCAGA CGCAGGACAA CCTCGGCGCG ATTCTCGCGG CGGGCGCGGG CAAGCCGGGT ACGACGTCGG TGGAGGCGAA GGCGTCGTCG TCGTGGCAGC CGGTGTTCAA TGCGGGCCTG CAGTACAACA TCACCGAGCA TTTCGGGCTG GTCGCGTCGG TGACCTACAT CCCGCTGAAG ACGACGTCGA CCGTGACGAT CAAGGCGGCC GACGGCACGG TGCTCTCCGA GTCGAAATCG GACCTGAAGG CCGACCCGAT CATCAGCTAC GTCGGGATGA CCTACAAGTT CTGA
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Protein sequence | MKKTLLCAAA GAAALAPLAA HAQSAGSNVV TLGWFHIMPQ QSSTPMTTNV APTPINTPLR LPPSFTSPGT GLHTSGADTV GLTVSHFLTD HIAVTSVAGV PPVFKVSGQG TIRPPGPAGA LGTQNIGLGS VNPIVKSVRQ WSPAVILQYY FAQANAKFRP FLGLGVSYNW FSDLQLNTNF IKQTQDNLGA ILAAGAGKPG TTSVEAKASS SWQPVFNAGL QYNITEHFGL VASVTYIPLK TTSTVTIKAA DGTVLSESKS DLKADPIISY VGMTYKF
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