Gene BamMC406_0236 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_0236 
Symbol 
ID6176191 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp270801 
End bp272072 
Gene Length1272 bp 
Protein Length423 aa 
Translation table11 
GC content76% 
IMG OID641679972 
Productmajor facilitator transporter 
Protein accessionYP_001806953 
Protein GI172059301 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00013187 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000000000803869 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACTGCC CTGCCGACTC CCACCCCGCC GCCGGTCGCC CCGCGCTCGG CGCACCGCCC 
GCGTTGAGCG CGGGCATGAC GCTCTTCTTC GCCGCGACGG TCGGCGTGAT CGTGATGGAC
CTGTTCGCCG CGCAGCCGCT AACCGGCCCG ATCAGCGCCG ACCTGCGGCT GCCGCCCGGC
CTCACCGGCC TCGTCGCGAT GCTGCCGCAG CTCGGCTACG CGGCCGGCCT CGTGCTGCTG
GTGCCGCTCG TCGACCTGCT GGAGAACCGC CGCCTGATCG TCGCGACGCT CGCCGCGTGC
GCGGCCGCGC TCGCGCTGCC GGCCTTCACG CGATCGGGCA CCGTGTTCCT GCTCGCGACG
CTGGCCGCCG GCGCCGCGTC GAGCGTGATC CAGATGCTGG TGCCGATGGC CGCGTCGATG
GCGCCCGAAG CGCAGCGCGG GCGCGCGGTC GGCAACGTGA TGAGCGGGCT GATGCTCGGC
ATCCTGCTGT CGCGGCCGCT CGCGAGCCTG ATCGCGGGCA CGGCCGGCTG GCGCGCGTTC
TACGCGCTGG CCGCGCTCGC GAATGCGGCG ATCGCGGCGG TGCTCGCGCT GCGCTTGCCG
CCGCGCGTGC CGTCGGCGAC GGCCGGCTAT CGCGCGCTGC TCGCCTCGAT GGGCCGCCTG
CTGGCCGACG AACCGGTGCT GCGCCGGCAT GCGCTGTCGG CCGCGCTCGC GATGGCCGCC
TTTAGCGCGT TCTGGACCGC CGTCGGGCTG CGGCTCGCGC AGCCGCCGTT CGGCCTCGAC
CTGCACGGGA TCGCGCTGTT CGCGTTCGCC GGCGCGAGCG GCGCGATCGT CACGCCGCTG
GCCGGCCGCG CCGGCGATCG CGGCCATGGC CCGGCCGCGC AGCGCCTCGC GCACGTGACG
ATGCTCGCGG CGCTCGCCGT GCTCGGCATC GCCGGCGCCG GCTGGTTCGG CTTCGATGCG
CACGCGCATC GCGACGTCGC GCTGGCGTTG CTGGCCGGCG GCGCGGCGCT GCTCGATGCG
GGCGTGATCG TCGACCAGAC GATCGGCCGC AGGGAAATCA ATCTGCTGAA CCCGGCCGCG
CGCGGGCGGC TGAACGGGTT GTTCGTCGGG CTGTTCTTCG TCGGCGGCGC GCTCGGCGCG
GCGCTTGCGG GCAGCGCGTG GGCATGGGGC GGGTGGAGCG CGGTGTGCGG CGTCGGCTTC
GCGTTCGCGG GCGCGGCCGC CGCGTTCGGC GTGTCGGCCG GGCGCCGGGT CACCGTGCGG
CCGCGCGCGT GA
 
Protein sequence
MNCPADSHPA AGRPALGAPP ALSAGMTLFF AATVGVIVMD LFAAQPLTGP ISADLRLPPG 
LTGLVAMLPQ LGYAAGLVLL VPLVDLLENR RLIVATLAAC AAALALPAFT RSGTVFLLAT
LAAGAASSVI QMLVPMAASM APEAQRGRAV GNVMSGLMLG ILLSRPLASL IAGTAGWRAF
YALAALANAA IAAVLALRLP PRVPSATAGY RALLASMGRL LADEPVLRRH ALSAALAMAA
FSAFWTAVGL RLAQPPFGLD LHGIALFAFA GASGAIVTPL AGRAGDRGHG PAAQRLAHVT
MLAALAVLGI AGAGWFGFDA HAHRDVALAL LAGGAALLDA GVIVDQTIGR REINLLNPAA
RGRLNGLFVG LFFVGGALGA ALAGSAWAWG GWSAVCGVGF AFAGAAAAFG VSAGRRVTVR
PRA