Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_0236 |
Symbol | |
ID | 6176191 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | - |
Start bp | 270801 |
End bp | 272072 |
Gene Length | 1272 bp |
Protein Length | 423 aa |
Translation table | 11 |
GC content | 76% |
IMG OID | 641679972 |
Product | major facilitator transporter |
Protein accession | YP_001806953 |
Protein GI | 172059301 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.00013187 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 1 |
Fosmid unclonability p-value | 0.000000000803869 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAACTGCC CTGCCGACTC CCACCCCGCC GCCGGTCGCC CCGCGCTCGG CGCACCGCCC GCGTTGAGCG CGGGCATGAC GCTCTTCTTC GCCGCGACGG TCGGCGTGAT CGTGATGGAC CTGTTCGCCG CGCAGCCGCT AACCGGCCCG ATCAGCGCCG ACCTGCGGCT GCCGCCCGGC CTCACCGGCC TCGTCGCGAT GCTGCCGCAG CTCGGCTACG CGGCCGGCCT CGTGCTGCTG GTGCCGCTCG TCGACCTGCT GGAGAACCGC CGCCTGATCG TCGCGACGCT CGCCGCGTGC GCGGCCGCGC TCGCGCTGCC GGCCTTCACG CGATCGGGCA CCGTGTTCCT GCTCGCGACG CTGGCCGCCG GCGCCGCGTC GAGCGTGATC CAGATGCTGG TGCCGATGGC CGCGTCGATG GCGCCCGAAG CGCAGCGCGG GCGCGCGGTC GGCAACGTGA TGAGCGGGCT GATGCTCGGC ATCCTGCTGT CGCGGCCGCT CGCGAGCCTG ATCGCGGGCA CGGCCGGCTG GCGCGCGTTC TACGCGCTGG CCGCGCTCGC GAATGCGGCG ATCGCGGCGG TGCTCGCGCT GCGCTTGCCG CCGCGCGTGC CGTCGGCGAC GGCCGGCTAT CGCGCGCTGC TCGCCTCGAT GGGCCGCCTG CTGGCCGACG AACCGGTGCT GCGCCGGCAT GCGCTGTCGG CCGCGCTCGC GATGGCCGCC TTTAGCGCGT TCTGGACCGC CGTCGGGCTG CGGCTCGCGC AGCCGCCGTT CGGCCTCGAC CTGCACGGGA TCGCGCTGTT CGCGTTCGCC GGCGCGAGCG GCGCGATCGT CACGCCGCTG GCCGGCCGCG CCGGCGATCG CGGCCATGGC CCGGCCGCGC AGCGCCTCGC GCACGTGACG ATGCTCGCGG CGCTCGCCGT GCTCGGCATC GCCGGCGCCG GCTGGTTCGG CTTCGATGCG CACGCGCATC GCGACGTCGC GCTGGCGTTG CTGGCCGGCG GCGCGGCGCT GCTCGATGCG GGCGTGATCG TCGACCAGAC GATCGGCCGC AGGGAAATCA ATCTGCTGAA CCCGGCCGCG CGCGGGCGGC TGAACGGGTT GTTCGTCGGG CTGTTCTTCG TCGGCGGCGC GCTCGGCGCG GCGCTTGCGG GCAGCGCGTG GGCATGGGGC GGGTGGAGCG CGGTGTGCGG CGTCGGCTTC GCGTTCGCGG GCGCGGCCGC CGCGTTCGGC GTGTCGGCCG GGCGCCGGGT CACCGTGCGG CCGCGCGCGT GA
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Protein sequence | MNCPADSHPA AGRPALGAPP ALSAGMTLFF AATVGVIVMD LFAAQPLTGP ISADLRLPPG LTGLVAMLPQ LGYAAGLVLL VPLVDLLENR RLIVATLAAC AAALALPAFT RSGTVFLLAT LAAGAASSVI QMLVPMAASM APEAQRGRAV GNVMSGLMLG ILLSRPLASL IAGTAGWRAF YALAALANAA IAAVLALRLP PRVPSATAGY RALLASMGRL LADEPVLRRH ALSAALAMAA FSAFWTAVGL RLAQPPFGLD LHGIALFAFA GASGAIVTPL AGRAGDRGHG PAAQRLAHVT MLAALAVLGI AGAGWFGFDA HAHRDVALAL LAGGAALLDA GVIVDQTIGR REINLLNPAA RGRLNGLFVG LFFVGGALGA ALAGSAWAWG GWSAVCGVGF AFAGAAAAFG VSAGRRVTVR PRA
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