| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0224 |
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| Symbol | |
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| ID | 6177979 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 258231 |
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| End bp | 259628 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641679960 |
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| Product | glucarate dehydratase |
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| Protein accession | YP_001806941 |
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| Protein GI | 172059289 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[R] General function prediction only |
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| COG ID | [COG4948] L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily |
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| TIGRFAM ID | [TIGR03247] glucarate dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.000115995 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCCGAAT CCCGCCGTGC CGGCACGCCG CGCGTCACGC GCATGCAGGT GATCCCCGTC
GCCGGCCGCG ACAGCATGCT GCTGAACCTG TGCGGCGCGC ACGCGCCGTA TTTCACGCGC
AACCTCGTGA TTCTCGACGA CAGCAGCGGC CATACGGGCG TCGGCGAAGT GCCCGGCGGC
GAAGGCATCC GTCAAGCGCT CGAACGGATG ACCGACCTCG TCGTCGGCCA GTCGATCGGG
CGTTACCAGG CGACGCTCAA CGCGGTGCGC GCGGCGCTGT CCGGCGCGGC GGCGGGCGCC
GGACGCACGA TCCGGCACGA AGTGACGTCG GCCGGCGAGG CGGCCGTGCT GCGCCAGCCG
CACGAGATCA ACCTGCGGCT CGACAACGTG ATCACCGCGA TCGAGGCCGC GCTGCTGGAC
CTGCTCGGCC AGCATCTCGA CGTGCCGGTC GCCGCGTTGC TCGGCGAAGG GCAGCAGCGC
GACGCGGTGC CGATGCTCGC GTACCTGTTC TACATCGGCG AGCGTCGCCG CACCGACCTG
CCGTATCGCG ACGAAACGCA TGCAACCGAT CCGTGGTTCC GCCTGCGCAA CGAAGCCGCG
CTCACGCCGG CCGCGATCGC GCGGCAGGCC GAGGCCGCGG TCGAACGCTA CGGCTTCGCC
GATTTCAAGC TGAAGGGCGG CGTGATGGCC GGCGCGGACG AGATGGAAGC GATCGCGGCG
ATCAAGACGC GCTTTCCCGA CGCCCGCGCG ACGCTCGACC CGAACGGTGC GTGGTCGCTC
GACGAAGCGG TCGCGCTGTG CCGCGGGCAA GGCCACCTGC TCGCGTATGC CGAGGACCCA
TGCGGGCCGG AAGCCGGCTA CTCGGGCCGC GAGGTAATGG CCGAATTCCG GCGGGCGACC
GGCATCCCGA CCGCGACCAA CATGATCGCG ACCGACTGGC GGCAGATGGA TCACGCGGTG
CGACTGCAGG CGGTCGACAT CCCGCTCGCC GACCCGCACT TCTGGACGAT GCAGGGTTCG
GTGCGGCTCG CGCAGCTGTG CCGCGACTGG GGGCTCACAT GGGGTTCCCA CTCGAACAAT
CACTTCGACG TGTCGCTCGC GATGTTCACC CATGCGGCCG CGGCGGCGCC CGGCACGATC
ACCGCGATCG ACACGCACTG GATCTGGCAG GAAGGCGACG CGCGGCTCAC GCGCGAACCG
CTCGCGATCG TCGGCGGGCA GGTGGCCGTG CCGGAGCGGC CGGGGCTGGG GATCGAGCTC
GACATGGCGC AGGTCGAGGC CGCGCATGCG CTGTATCGGG AGGTGGGCGG CACGACGCGC
GATGATGCGA TGGCGATGCG GTATCTGGTG CCAGGGTGGA CGTATGATCC GAAGCGGCCG
AGTTTCGGGC GCGGATGA
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| Protein sequence | MSESRRAGTP RVTRMQVIPV AGRDSMLLNL CGAHAPYFTR NLVILDDSSG HTGVGEVPGG
EGIRQALERM TDLVVGQSIG RYQATLNAVR AALSGAAAGA GRTIRHEVTS AGEAAVLRQP
HEINLRLDNV ITAIEAALLD LLGQHLDVPV AALLGEGQQR DAVPMLAYLF YIGERRRTDL
PYRDETHATD PWFRLRNEAA LTPAAIARQA EAAVERYGFA DFKLKGGVMA GADEMEAIAA
IKTRFPDARA TLDPNGAWSL DEAVALCRGQ GHLLAYAEDP CGPEAGYSGR EVMAEFRRAT
GIPTATNMIA TDWRQMDHAV RLQAVDIPLA DPHFWTMQGS VRLAQLCRDW GLTWGSHSNN
HFDVSLAMFT HAAAAAPGTI TAIDTHWIWQ EGDARLTREP LAIVGGQVAV PERPGLGIEL
DMAQVEAAHA LYREVGGTTR DDAMAMRYLV PGWTYDPKRP SFGRG
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