| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0210 |
|---|
| Symbol | |
|---|
| ID | 6178649 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010551 |
|---|
| Strand | + |
|---|
| Start bp | 246924 |
|---|
| End bp | 248138 |
|---|
| Gene Length | 1215 bp |
|---|
| Protein Length | 404 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641679945 |
|---|
| Product | cation diffusion facilitator family transporter |
|---|
| Protein accession | YP_001806927 |
|---|
| Protein GI | 172059275 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0053] Predicted Co/Zn/Cd cation transporters |
|---|
| TIGRFAM ID | [TIGR01297] cation diffusion facilitator family transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.904407 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCGCG GGCGCCGTTT GATAGAATTC CATATCCCAA CCGATATCTC GTATTTCATG
TCCACGTTTT CTGGCGACGC GCAAAGCGCG GATAAGCACA CGGTAGCGCG CAAGAGCACC
CTCGTCAGTA TCGTGCTGAA TGTGGTGCTT GCGACGTTTC AGATCGCCGT GGGTGTGGTT
GCGCATTCGC AGGCATTGAT TGCCGATGGC GTCCATTCGA TTTCCGATTT GATCTCGGAT
TTTGTCGTCC TGGTTGCGAA TCGCCATAGT GGTGCATCGC CGGATGCCGA TCACAATTAC
GGACACAGCC GCTACGAGAC GGTCGCATCG CTGTTCCTCG GCGCGATCCT GATCGCGGTC
GGTATCGGCA TGCTTTGGCG CGCGGGCAAC CGTCTCGTGA ACCTCGAGAA CATCCCGGCC
GTCCATTTCT CCGCACTGAT CGTCGCGCTG ACCGTGCTCG TGTCGAAAGA GGCGCTGTTC
CGCTACATGC TGCGCGAGGC GCGGCGCGTG CGCTCGGCGA TGCTCGTCGC GAACGCGTGG
CATGCGCGTT CGGACGCCGC ATCGTCGCTC GTCGTCGCGA TCGGCATCGT CGGCAGCCTC
GCCGGCGTGC GGCTGCTCGA CCCGATCGCC GCCGCGATCG TCGGCTTCAT GGTCGCGCGC
ATGGGCTGGA CGTTCGGCTA TGACGCGTTG CAGGACCTGT CGGATCGCGC GCTCGACACC
TCCGCGTCGG CCGAGATCCG CGCGCTGCTC GTGGCCACGC CGGGCGTGCG CGACGTGCAC
GAGCTGCGCA CGCGCAAGAT GGGCGATGCG GCGCTCGTCG ACGCGCACAT CCTCGTCGAT
CCGATGATCT CCGTATCCGA AGGGCACTAC ATCGCGGAAA CCGCGCGTGC GCGCGTGCTG
CGCGACCCGC GCGTGCTGGA CGCGCTGATC CACGTCGATC CCGAGAACGA CGTGGCGCGC
CGTCCGGCGC TCGCGCTGCC GCCGCGCGCC GAGATCGCGA CGCGGCTCGA GGCCGCGCTC
GCGCAACGCG GGCTGCATCC GGCCGCGATC AACCTGCACT ACCTGAGTAC GGGGCTCGAA
ATCGACGTGA CGCTGGACGC CGGCGCGGGC GACACCGACG CGGCGCTGGC CGGCCGGCTC
GATGTCGACA CGCTCAAGCG CCAGTTCGGC GCGCGCCGGA TCGGATTCAC GCGCGGGCTG
CCCGCGCAGC CCTGA
|
|---|
| Protein sequence | MPRGRRLIEF HIPTDISYFM STFSGDAQSA DKHTVARKST LVSIVLNVVL ATFQIAVGVV
AHSQALIADG VHSISDLISD FVVLVANRHS GASPDADHNY GHSRYETVAS LFLGAILIAV
GIGMLWRAGN RLVNLENIPA VHFSALIVAL TVLVSKEALF RYMLREARRV RSAMLVANAW
HARSDAASSL VVAIGIVGSL AGVRLLDPIA AAIVGFMVAR MGWTFGYDAL QDLSDRALDT
SASAEIRALL VATPGVRDVH ELRTRKMGDA ALVDAHILVD PMISVSEGHY IAETARARVL
RDPRVLDALI HVDPENDVAR RPALALPPRA EIATRLEAAL AQRGLHPAAI NLHYLSTGLE
IDVTLDAGAG DTDAALAGRL DVDTLKRQFG ARRIGFTRGL PAQP
|
|---|
| |