| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0199 |
|---|
| Symbol | |
|---|
| ID | 6177687 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010551 |
|---|
| Strand | + |
|---|
| Start bp | 235722 |
|---|
| End bp | 237140 |
|---|
| Gene Length | 1419 bp |
|---|
| Protein Length | 472 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641679934 |
|---|
| Product | S-adenosyl-L-homocysteine hydrolase |
|---|
| Protein accession | YP_001806916 |
|---|
| Protein GI | 172059264 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0499] S-adenosylhomocysteine hydrolase |
|---|
| TIGRFAM ID | [TIGR00936] adenosylhomocysteinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.868266 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCCA TTATCGATTC GCAAGCTTCC AAGGATTACG TCGTCGCCGA CATGGCGCTT
GCCGGCTGGG GCCGCAAGGA ACTGAACATC GCCGAGACCG AAATGCCCGG CCTCGTGCAG
ATCCGCGACG AATACAAGGC GCAGCAGCCG CTGAAGGGCG CGCGCATCGC GGGCTCGCTG
CACATGACGA TCCAGACCGG CGTGCTGATC GAGACGCTGA AGGCGCTCGG CGCCGATGTC
CGCTGGGCGT CGTGCAACAT CTTCTCGACC CAGGATCACG CCGCTGCCGC GATCGTCGAA
GCCGGCACGC CGGTGTTCGC GTTCAAGGGC GAGTCGCTCG ACGAATACTG GGAGTTCTCG
CACCGCATCT TCGAATGGCC GAACGGCGAA TTCGCGAACA TGATCCTGGA CGACGGCGGC
GACGCAACGC TGCTGCTGAT CCTCGGCGCG AAGGCCGAGA AGGACCGTTC GGTGATCGCG
AAGCCGACCA ACGAGGAAGA AGTCGCGCTG TACAAGTCGA TCGCGAAGCA CCTCGACGCC
GACCCGACCT GGTACTCGAC GCGCCTCGCC CACATCAAGG GCGTGACCGA AGAAACCACG
ACCGGCGTGC ACCGCCTGTA CCAGATGGAA AAGGACGGCC GCCTGCCGTT CCCGGCGTTC
AACGTGAACG ACTCGGTCAC GAAGTCGAAG TTCGACAACC TGTACGGCTG CCGTGAATCG
CTCGTCGACG GCATCAAGCG CGCGACGGAC GTGATGATCG CGGGCAAGGT CGCGGTCGTC
GCGGGCTACG GCGACGTGGG CAAGGGCTGC GCGCAGTCGC TGCGCGGCCT CGGCGCGACC
GTGTGGATCA CCGAAATCGA TCCGATCTGC GCGCTGCAGG CGGCGATGGA AGGCTACCGC
GTCGTGACGA TGGAATACGC GGCCGACAAG GCCGACATCT TCGTGACGGC GACCGGCAAC
TACCACGTGA TCAACCACGA TCACATGAAG GCGATGCGCC ACAACGCGAT CGTCTGCAAC
ATCGGTCACT TCGACTCGGA AATCGACGTT GCGTCGACCC GCCAGTACCA GTGGGAAAAC
ATCAAGCCGC AGGTCGACCA CATCATCTTC CCGGACGGCA AGCGCGTGAT CCTGCTGGCC
GAAGGCCGCC TCGTGAACCT TGGCTGCGCG ACCGGCCACC CGTCGTTCGT GATGTCGAAC
TCGTTCGCGA ACCAGACGCT CGCGCAGATC GAGCTGTTCA TGCGCGGCGC CGAGTACGAG
AACAAGGTGT ACGTGCTGCC GAAGCATCTC GATGAAAAGG TCGCGCGCCT GCACCTCGCG
CGCATCGGCG CGAACCTGTC CGTGCTGACG GACGAGCAGG CTTCGTACAT CGGCGTGCAG
AAGGACGGCC CGTTCAAGCC GAACCACTAC CGCTACTGA
|
|---|
| Protein sequence | MNAIIDSQAS KDYVVADMAL AGWGRKELNI AETEMPGLVQ IRDEYKAQQP LKGARIAGSL
HMTIQTGVLI ETLKALGADV RWASCNIFST QDHAAAAIVE AGTPVFAFKG ESLDEYWEFS
HRIFEWPNGE FANMILDDGG DATLLLILGA KAEKDRSVIA KPTNEEEVAL YKSIAKHLDA
DPTWYSTRLA HIKGVTEETT TGVHRLYQME KDGRLPFPAF NVNDSVTKSK FDNLYGCRES
LVDGIKRATD VMIAGKVAVV AGYGDVGKGC AQSLRGLGAT VWITEIDPIC ALQAAMEGYR
VVTMEYAADK ADIFVTATGN YHVINHDHMK AMRHNAIVCN IGHFDSEIDV ASTRQYQWEN
IKPQVDHIIF PDGKRVILLA EGRLVNLGCA TGHPSFVMSN SFANQTLAQI ELFMRGAEYE
NKVYVLPKHL DEKVARLHLA RIGANLSVLT DEQASYIGVQ KDGPFKPNHY RY
|
|---|
| |