Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_0198 |
Symbol | fliA |
ID | 6178583 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 234636 |
End bp | 235370 |
Gene Length | 735 bp |
Protein Length | 244 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641679933 |
Product | flagellar biosynthesis sigma factor |
Protein accession | YP_001806915 |
Protein GI | 172059263 |
COG category | [K] Transcription |
COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
TIGRFAM ID | [TIGR02479] RNA polymerase sigma factor, FliA/WhiG family [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.410275 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGATGTACA ACGCTCAAGG CAAGATGACC CAGGCCGACG TGCTCGCGCA ATATGCGCCG CTCGTGCGGC GCCTGGGCCT GCAGCTCGTC GCGAAGATGC CGGCGAGCGT CGACCTCGAC GACCTGATCC AGGCCGGCAT GATCGGGCTG ATGGATGCGG CCGGCCGCTA CAAGGAAGAC CAGGGCGCGC AGTTCGAGAC CTACGCGACG CAGCGCATCC GCGGCGCGAT GCTCGACGAG CTGCGCAGCA ACGACTGGCT GCCGCGCAGC CTGCGCAAGA CGTCGCGCGA GGTCGAGTAC GCGGTGCACC AGGTCGAGCA GCAGCTCGGC CGCTCGGCGA GCGAGACCGA GATCGCGGAG CACCTGAAGA TGCCGCTCGA CGAATACCAG GGGATGCTGC AGGACCTGCA CGGCAGCCAG CTCATCTACT ACGAGGATTT CGATCGCGCG GCCGACGACG AGCCGTTCCT CGACCGCTAT CGCGTCGATC ACGCCGATCC GTTGTCGGCG CTGCTCGACG ACCACCTGCG CGAGGCGCTC GTCGACGCGA TCGACCGGCT GCCCGAGCGC GAGAAGCTGC TGATGTCGCT GTACTACGAG CGCGGGCTGA ACCTGCGCGA GATCGGCGCG GTGCTCGAAG TGAGCGAGTC GCGCGTGTGC CAGCTGCACA GTCAGGCCGT CGCGCGCCTG CGCGCGCGGT TGCGCGAACA GGCGTGGGTC GGCGCGGAGA ATTGA
|
Protein sequence | MMYNAQGKMT QADVLAQYAP LVRRLGLQLV AKMPASVDLD DLIQAGMIGL MDAAGRYKED QGAQFETYAT QRIRGAMLDE LRSNDWLPRS LRKTSREVEY AVHQVEQQLG RSASETEIAE HLKMPLDEYQ GMLQDLHGSQ LIYYEDFDRA ADDEPFLDRY RVDHADPLSA LLDDHLREAL VDAIDRLPER EKLLMSLYYE RGLNLREIGA VLEVSESRVC QLHSQAVARL RARLREQAWV GAEN
|
| |