Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_0186 |
Symbol | |
ID | 6178333 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 221996 |
End bp | 222757 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 71% |
IMG OID | 641679921 |
Product | chemoreceptor glutamine deamidase CheD |
Protein accession | YP_001806903 |
Protein GI | 172059251 |
COG category | [N] Cell motility [T] Signal transduction mechanisms |
COG ID | [COG1871] Chemotaxis protein; stimulates methylation of MCP proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 38 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGCGGCC TGCCGATCGC GACCAATCGC TACTTCGACA ATCACTTCGA ACGCCCGGGC GTGAAGCTGC TGCCGAACGA GTTCTACACG ACGTCCGAGG ACATGGTGCT GATGACCGTG CTCGGCTCGT GCGTCGCCGC GTGCCTGCAC GATCCGCTCG CGGGCATCGG CGGGATGAAT CACTTCATGC TGCCCGACGA CGGCGCCGAT GCCGGCGCGG CCGCGTCGGA TTCGATGCGC TACGGCGCGT ACGCGATGGA AGTGCTGATC AACGAACTGA TCAAGGCCGG CGGGCGCCGC GAGCGCCTCG AGGCGAAGGT GTTCGGCGGC GCGGCCGTGC TGGCCGGGAT GACGACGATC AACATCGGCG ATCGCAACGC GGATTTCGTG CGCCGCTATC TCGCGCTCGA GCGCATCCGC ATCACCGCGG AGGATCTGCA GGGCGTGCAC CCGCGCAAGG TCGCGTTCAT GCCGCGCACC GGGCGCGCGA TGGTGAAGAA GCTGCGGCTG CAGGTGCCGG GCGTGACCGA GCGCGAAGCC GCGCTGGCGC GCGAGGCCGA CCGCGTGCGG GCCGGCCGCC AGCGCGCGCA CGTCGAGCTG TTCGCGGCGA AGCGGCCGGC CGCGCCGCCG CCGGCGCGCC CGCGCATCGA GCTGTTCGGC GCACGCGGCG CCGGCGGCGC GCAGACGACG ACTACCAAGA CCGCCAGCCC GTATGCCGGC AGCCCGACCG CGGCCAACCT TTCGAGAAAG CAGGAGGCAT GA
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Protein sequence | MSGLPIATNR YFDNHFERPG VKLLPNEFYT TSEDMVLMTV LGSCVAACLH DPLAGIGGMN HFMLPDDGAD AGAAASDSMR YGAYAMEVLI NELIKAGGRR ERLEAKVFGG AAVLAGMTTI NIGDRNADFV RRYLALERIR ITAEDLQGVH PRKVAFMPRT GRAMVKKLRL QVPGVTEREA ALAREADRVR AGRQRAHVEL FAAKRPAAPP PARPRIELFG ARGAGGAQTT TTKTASPYAG SPTAANLSRK QEA
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