Gene BamMC406_0178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_0178 
Symbol 
ID6177771 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp213021 
End bp213575 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content65% 
IMG OID641679913 
Producttranscriptional activator FlhC 
Protein accessionYP_001806895 
Protein GI172059243 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAAGCA AAAGCGTCGT GATCGAGGTG AAGGAAATCA CCCTCGCCAT CGAACTGATC 
GAACTGGGCG CCCGCCTGCA GCTGCTGGAG GCGGAGACGA GCCTGTCGCG CGATCGCCTG
ATCAAGCTGT ACAAGGAGCT GAAGGGCGTG TCGCCGCCGA AGGGGATGCT GCCGTTCTCG
ACCGACTGGT TCATGACGTG GCAGCCGAAC ATCCATTCGT CGCTGTTCTA CAACATCTAC
CGGTTCATGC AGGACCACGG CCGCTGCGAT CCGATCCAGT CGATCGTGAA GGCGTACCGG
CTCTACCAGG AGCACGTGAA CCTGTCCGGC GACGAAGCCG CGCTGAGTCT CACGCGCGCA
TGGACGCTCG TGCGCTTCTT CGACTCGGGG ATGCTGCAGA TGACCCCGTG CACGCGCTGC
GGCGGCCACT TCGTCGCGCA TGCGCATGAT CCACATCAAG GTTTCGTGTG TGGCCTCTGC
CAGCCGCCGT CGCGCGCCGG CAAGACCCGC AAGGCCGCCG CCGCGCGCGC CGAACTGGCT
GCCGCCACGG CCTGA
 
Protein sequence
MASKSVVIEV KEITLAIELI ELGARLQLLE AETSLSRDRL IKLYKELKGV SPPKGMLPFS 
TDWFMTWQPN IHSSLFYNIY RFMQDHGRCD PIQSIVKAYR LYQEHVNLSG DEAALSLTRA
WTLVRFFDSG MLQMTPCTRC GGHFVAHAHD PHQGFVCGLC QPPSRAGKTR KAAAARAELA
AATA