Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_0141 |
Symbol | |
ID | 6177329 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | - |
Start bp | 164088 |
End bp | 165476 |
Gene Length | 1389 bp |
Protein Length | 462 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641679876 |
Product | L-serine dehydratase 1 |
Protein accession | YP_001806859 |
Protein GI | 172059207 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1760] L-serine deaminase |
TIGRFAM ID | [TIGR00720] L-serine dehydratase, iron-sulfur-dependent, single chain form |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAGTCA GCGTGTTTGA CCTCTTCAAG ATCGGCATCG GCCCGTCCAG TTCGCATACG GTCGGACCGA TGCGCGCGGC GCTGATGTTC GTCCAGGGCC TCGAGCGCGA CGGGCTGCTC GACGCGACAG CCAACGTGAA GGTCGAGCTG TACGGGTCGC TCGGCGCGAC CGGCAAGGGC CACGGCACCG ACCGCGGCGT AATGCTCGGC CTGCTCGGCG ACGCGCCCGA CACCGTCGAT CCCGACACGA TCGACGCGCG GCTCGACGAC GTCCGCAAGT CGAAGCAGCT CGCGCTGCTC GGCACGCATC CGGTGCCGTT CGTGCTGAAG GAGCACATCG CGTTCTATCG GCAGGCGCTG CCCGAACACC CGAACGGGAT GAAGCTGCGC GCATCCGACG CGAACGGCGA CGTGCTGGTC GAGCGCACCT ACCTGTCGGT CGGCGGCGGC TTCGTCGTGA CGGCCGGCGC GCCGAACACG AAGGTGCTGA GCGCGGCCGA GCAGATGACG CACCCGTTCC GCACCGGCGC CGAGCTGCTC GCGCTGACCG AGGCGACCGG CAAATCGATC GCGCGGCTGA TGTGGGAAAA CGAGCGCGCG TGGCACACCG AGGAAGAGAC GCGCGACGGG CTGCTGAAGA TCTGGGCCGT GATGCAGTCG TGCGTGTCGC GCGGCTGCGG GATCGGCAAC CCGGACGCCG ACGGCAACCT GCCCGGCCCG TTCCAGGTCA AGCGCCGCGC ACCGCAGCTG TATCGCACGC TGACCGGCAA CCCCGAACAG GCGCTGCAGG ATCCGCTGTC GATGATCGAC TGGATCAACC TGTACGCGAT CGCCGTCAAC GAGGAAAACG CGGCCGGCGG CCGCGTCGTC ACCGCGCCGA CCAACGGCGC GGCCGGCATC ATTCCGGCGG TGCTGCACTA CTACACGCGC TTCACGCCGG GCGCGAACGA ACAGGGCGTG ATCGACTTCC TGCTGACGGC CGCGGCAATC GGCATTCTGT ACAAGCTCAA CGCATCGATT TCGGGCGCGG AAGTGGGCTG CCAGGGCGAA GTGGGCGTCG CGTGCTCGAT GGCGGCCGGC GCGCTTGCGG CCGTGCTCGG CGGCACGCCG CGCCAGGTCG AGAACGCGGC CGAGATCGGG ATGGAGCACA ACCTCGGCCT CACCTGCGAC CCGGTCGGCG GGATGGTGCA GATCCCGTGC ATCGAGCGCA ACGCGATGGC ATCGGTGAAG GCCGTCAACG CGGCGCGCAT GGCGCTGCGC GGCGACGGCT CGCACTACGT GTCGCTCGAC TCGGTGATCA AGACGATGCG CGAGACGGGC GCCGACATGA AGACGAAGTA CAAGGAAACC TCGCGGGGTG GCCTGGCGGT GAATATCGTC GAGTGTTGA
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Protein sequence | MAVSVFDLFK IGIGPSSSHT VGPMRAALMF VQGLERDGLL DATANVKVEL YGSLGATGKG HGTDRGVMLG LLGDAPDTVD PDTIDARLDD VRKSKQLALL GTHPVPFVLK EHIAFYRQAL PEHPNGMKLR ASDANGDVLV ERTYLSVGGG FVVTAGAPNT KVLSAAEQMT HPFRTGAELL ALTEATGKSI ARLMWENERA WHTEEETRDG LLKIWAVMQS CVSRGCGIGN PDADGNLPGP FQVKRRAPQL YRTLTGNPEQ ALQDPLSMID WINLYAIAVN EENAAGGRVV TAPTNGAAGI IPAVLHYYTR FTPGANEQGV IDFLLTAAAI GILYKLNASI SGAEVGCQGE VGVACSMAAG ALAAVLGGTP RQVENAAEIG MEHNLGLTCD PVGGMVQIPC IERNAMASVK AVNAARMALR GDGSHYVSLD SVIKTMRETG ADMKTKYKET SRGGLAVNIV EC
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