Gene BamMC406_0119 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_0119 
Symbol 
ID6178594 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp138546 
End bp139700 
Gene Length1155 bp 
Protein Length384 aa 
Translation table11 
GC content68% 
IMG OID641679854 
Productputative aminotransferase 
Protein accessionYP_001806837 
Protein GI172059185 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0436] Aspartate/tyrosine/aromatic aminotransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAAGCG CCACCACGCC CCGTTCGAAA CTGCCGGACG TCGGGACGAC GATCTTCACT 
GTGATCGGCC AACTCGCCGC GCAGCACGAT GCGCTGAACC TGTCGCAGGG CGCGCCGAAC
TTCGCGCCCG ATCCGGCGCT CGTCGAGGGC GTCGCGCGCG CGATGCGCGA CGGCCACAAC
CAGTACGCGC CGATGGCCGG CCTCACGTCG TTGCGCGAGC GGCTCGCGGA GAAGACCGAG
GCGCTGTACG GCGCGCGCTA CGACCCCGGC ACCGAGATCA CCGTGATCGC GAGCGCGAGC
GAAGGGCTCT ACGCGGCGAT CAGCGCGCTC GTGCATCCGG GCGATGAAGT GATCTATTTC
GAGCCGTCGT TCGACAGCTA TGCGCCGATC GTGCGGATGC AGGGCGCGAC GCCGGTCGCG
ATCAAGCTGT CGTCCGGGCA TTTCCGCGTG AACTGGGACG AAGTGGCCGC GGCGATCACG
CCGCGCACGC GGATGATCAT CGTCAACACG CCGCACAACC CGACCGCGAC GGTGTTTTCC
GCCGACGATC TCGAACGGCT CGCGCAGCTC ACGCGCGATA CCGACATCGT GGTGTTGTCC
GACGAAGTCT ACGAGCACGT CGTGTTCGAC GGCGCGCAGC ACCAGAGCGT CGCGCGTCAT
CGCGAGCTGG CCGAGCGCAG CGTGATCGTG TCGTCGTTCG GCAAGTCGTT CCACGTGACG
GGCTGGCGGG TCGGCCATTG CCTCGCGCCG GCGGAGCTGA TGGGCGAGAT CCGCAAGGTG
CACCAGTTCA TGGTGTTCTC GGCCGATACG CCGATGCAGG TCGCGTTCGC GGAGATCCTC
GCGCGGCCGG AAAGCTATCT CGGCCTGTCG GCGTTCTACC AGGCCAAGCG CGACCTGCTC
GCGCGCGAGC TGGCCGATTC GCGCTTCGAG CTGCTGTCGA GCGAAGGCTC GTTCTTCATG
CTCGCGCGGT TCCGGCACTT CTCGGACGAG CGCGACAGCG ACTTCGTGCT GCGCCTGATC
CGCGATGCGC GCGTCGCGAC GATTCCGCTG TCCGCGTTCT ATGCCGACGG CACCGACGCG
GGCGTGATTC GCCTCAGTTT CTCGAAGGAC GACGCGACGC TGATCGAAGG CGCGCGGCGG
TTGCGGTCGC TGTAA
 
Protein sequence
MRSATTPRSK LPDVGTTIFT VIGQLAAQHD ALNLSQGAPN FAPDPALVEG VARAMRDGHN 
QYAPMAGLTS LRERLAEKTE ALYGARYDPG TEITVIASAS EGLYAAISAL VHPGDEVIYF
EPSFDSYAPI VRMQGATPVA IKLSSGHFRV NWDEVAAAIT PRTRMIIVNT PHNPTATVFS
ADDLERLAQL TRDTDIVVLS DEVYEHVVFD GAQHQSVARH RELAERSVIV SSFGKSFHVT
GWRVGHCLAP AELMGEIRKV HQFMVFSADT PMQVAFAEIL ARPESYLGLS AFYQAKRDLL
ARELADSRFE LLSSEGSFFM LARFRHFSDE RDSDFVLRLI RDARVATIPL SAFYADGTDA
GVIRLSFSKD DATLIEGARR LRSL