Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_0119 |
Symbol | |
ID | 6178594 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 138546 |
End bp | 139700 |
Gene Length | 1155 bp |
Protein Length | 384 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641679854 |
Product | putative aminotransferase |
Protein accession | YP_001806837 |
Protein GI | 172059185 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGAAGCG CCACCACGCC CCGTTCGAAA CTGCCGGACG TCGGGACGAC GATCTTCACT GTGATCGGCC AACTCGCCGC GCAGCACGAT GCGCTGAACC TGTCGCAGGG CGCGCCGAAC TTCGCGCCCG ATCCGGCGCT CGTCGAGGGC GTCGCGCGCG CGATGCGCGA CGGCCACAAC CAGTACGCGC CGATGGCCGG CCTCACGTCG TTGCGCGAGC GGCTCGCGGA GAAGACCGAG GCGCTGTACG GCGCGCGCTA CGACCCCGGC ACCGAGATCA CCGTGATCGC GAGCGCGAGC GAAGGGCTCT ACGCGGCGAT CAGCGCGCTC GTGCATCCGG GCGATGAAGT GATCTATTTC GAGCCGTCGT TCGACAGCTA TGCGCCGATC GTGCGGATGC AGGGCGCGAC GCCGGTCGCG ATCAAGCTGT CGTCCGGGCA TTTCCGCGTG AACTGGGACG AAGTGGCCGC GGCGATCACG CCGCGCACGC GGATGATCAT CGTCAACACG CCGCACAACC CGACCGCGAC GGTGTTTTCC GCCGACGATC TCGAACGGCT CGCGCAGCTC ACGCGCGATA CCGACATCGT GGTGTTGTCC GACGAAGTCT ACGAGCACGT CGTGTTCGAC GGCGCGCAGC ACCAGAGCGT CGCGCGTCAT CGCGAGCTGG CCGAGCGCAG CGTGATCGTG TCGTCGTTCG GCAAGTCGTT CCACGTGACG GGCTGGCGGG TCGGCCATTG CCTCGCGCCG GCGGAGCTGA TGGGCGAGAT CCGCAAGGTG CACCAGTTCA TGGTGTTCTC GGCCGATACG CCGATGCAGG TCGCGTTCGC GGAGATCCTC GCGCGGCCGG AAAGCTATCT CGGCCTGTCG GCGTTCTACC AGGCCAAGCG CGACCTGCTC GCGCGCGAGC TGGCCGATTC GCGCTTCGAG CTGCTGTCGA GCGAAGGCTC GTTCTTCATG CTCGCGCGGT TCCGGCACTT CTCGGACGAG CGCGACAGCG ACTTCGTGCT GCGCCTGATC CGCGATGCGC GCGTCGCGAC GATTCCGCTG TCCGCGTTCT ATGCCGACGG CACCGACGCG GGCGTGATTC GCCTCAGTTT CTCGAAGGAC GACGCGACGC TGATCGAAGG CGCGCGGCGG TTGCGGTCGC TGTAA
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Protein sequence | MRSATTPRSK LPDVGTTIFT VIGQLAAQHD ALNLSQGAPN FAPDPALVEG VARAMRDGHN QYAPMAGLTS LRERLAEKTE ALYGARYDPG TEITVIASAS EGLYAAISAL VHPGDEVIYF EPSFDSYAPI VRMQGATPVA IKLSSGHFRV NWDEVAAAIT PRTRMIIVNT PHNPTATVFS ADDLERLAQL TRDTDIVVLS DEVYEHVVFD GAQHQSVARH RELAERSVIV SSFGKSFHVT GWRVGHCLAP AELMGEIRKV HQFMVFSADT PMQVAFAEIL ARPESYLGLS AFYQAKRDLL ARELADSRFE LLSSEGSFFM LARFRHFSDE RDSDFVLRLI RDARVATIPL SAFYADGTDA GVIRLSFSKD DATLIEGARR LRSL
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