| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0107 |
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| Symbol | atpC |
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| ID | 6176859 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 119137 |
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| End bp | 119562 |
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| Gene Length | 426 bp |
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| Protein Length | 141 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641679842 |
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| Product | F0F1 ATP synthase subunit epsilon |
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| Protein accession | YP_001806825 |
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| Protein GI | 172059173 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0355] F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit) |
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| TIGRFAM ID | [TIGR01216] ATP synthase, F1 epsilon subunit (delta in mitochondria) |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 0.722454 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAACCA TCAAAGTAGA CGTCGTCAGC GCGGAAGAGC AGATCTTCTC GGGCGAGGCG
AAATTCGTCG CGCTGCCGGG CGAAACGGGT GAGCTGGGCA TTCTGCCGGG CCACACGCCG
CTGATCACGC GGATTCGTCC GGGTGCGGTG CGCATCGAAG TCGAGGGCGG CAACGACGAA
TTCGTGTTCG TCGCGGGCGG CATTCTCGAA GTGCAGCCGG GCGCCGTGAC GGTGCTCGCC
GACACCGCGA TCCGCGGCAA GGACCTCGAT GCGGCGAAAG CCGAGGAAGC GCGCAAGCGT
GCCGAGGAAA CGCTGCAGAA CGCGAAGTCC GACCTCGACC TCGCAAAGGC GCAATCCGAG
CTCGCGACCG CGATGGCGCA GCTCGAGGCG ATCCAGCGCC TCGCGAAGAT TCGCAGCCGG
CACTAA
|
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| Protein sequence | MATIKVDVVS AEEQIFSGEA KFVALPGETG ELGILPGHTP LITRIRPGAV RIEVEGGNDE
FVFVAGGILE VQPGAVTVLA DTAIRGKDLD AAKAEEARKR AEETLQNAKS DLDLAKAQSE
LATAMAQLEA IQRLAKIRSR H
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