| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0090 |
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| Symbol | |
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| ID | 6176967 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | + |
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| Start bp | 100453 |
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| End bp | 101610 |
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| Gene Length | 1158 bp |
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| Protein Length | 385 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641679825 |
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| Product | extracellular ligand-binding receptor |
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| Protein accession | YP_001806808 |
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| Protein GI | 172059156 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.230544 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATGA ATCGATGGAT GGAGGTTTTG CTTGCCGCGG GCCTCGTGTG TGCGGCGGCC
ACGGCGTCGG CACAGGTGAA GATCGGCGTG ACGCTGTCGG CCACCGGGCC GGCCGCATCG
CTCGGGATTC CGGAAAAGAA CACGATCGCG CTGCTGCCGA AGGAAATCGC GGGCAAGAGC
GTCCAGTACA TCGTGCTCGA CGATGCGTCC GACACGAGCC GCGCGGTGCA GAACGTGCGC
AAGCTGATCG ACGAGGATCA CGTCGACGCG ATCATCGGTT CGTCCGTCAC GCCGAATTCG
CTCGCGATGC TCGACCCGGT GTCGCAGGGC AAGACGCCGA CGATCTCGCT CGCGGCGAGT
GCGCAGATCA TCGCGCCGAT GGACACGAAG CGCGCGTGGA TGTTCAAGGT GCCGCAAAAC
GACCAGCTGA TGGCCGACGC GATCGCCGGC TACATGGCGA AGCACGGCGT GAAGACGATC
GGCTTCATCG GCTTCGCCGA CGCGTACGGC GACAGCTGGT ACAACACATT CAACGCGGCC
GCGACGAAGA ACGGGTTGAA GGTCGTGTCG AACGAGCGCT ACAACCGCAC CGATGCGTCG
GTGATGGGGC AGGTGCTGAA GCTGCTGGGC TCGAATCCCG ACGCGGTGCT GATCGCCGGT
TCCGGCACGC CGGCCGCGCT GCCCGCCAAG ACGCTCAAGG AGCGCGGCTA CAAGGGCAAG
GTGTACCAGA CGCACGGCGT CGCGAACAAC GACTTCCTGC GCGTGTGCGG CAAGGATTGC
GAAGGCGAGA TCCTGCCGGC CGGGCCGGTG CTCGTGACCG ACCAGCTGCC CGATTCGAAT
CCGGTGAAGA AGCCGGCGCT CGGCTACAAG GCTGCGTACG AGAAGGCGTA CGGCGCGGGC
TCGCTGTCGA CCTTCGGCGG GCATGCGTGG GATGCGGGGC TGCTGCTGCA GCGTGCGATT
CCCGACGCGC TGAAGAAGGG CCAGCCAGGC ACCGAGGCGT TCCGCGAGGC GCTGCGCGCG
TCGCTCGAGA GCGTGAAGGA CCTGCCCGTG TCGCACGGCG TGATCAACAT GACGTCGACC
GACCACAACG GCTTCGACAC GCGTGCGCGC GTGATGGTGC AGATCGTCGA CGGCAAGTGG
AAGCTGCAGG CCGAGTAA
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| Protein sequence | MKMNRWMEVL LAAGLVCAAA TASAQVKIGV TLSATGPAAS LGIPEKNTIA LLPKEIAGKS
VQYIVLDDAS DTSRAVQNVR KLIDEDHVDA IIGSSVTPNS LAMLDPVSQG KTPTISLAAS
AQIIAPMDTK RAWMFKVPQN DQLMADAIAG YMAKHGVKTI GFIGFADAYG DSWYNTFNAA
ATKNGLKVVS NERYNRTDAS VMGQVLKLLG SNPDAVLIAG SGTPAALPAK TLKERGYKGK
VYQTHGVANN DFLRVCGKDC EGEILPAGPV LVTDQLPDSN PVKKPALGYK AAYEKAYGAG
SLSTFGGHAW DAGLLLQRAI PDALKKGQPG TEAFREALRA SLESVKDLPV SHGVINMTST
DHNGFDTRAR VMVQIVDGKW KLQAE
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