Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_0086 |
Symbol | |
ID | 6179115 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | + |
Start bp | 95339 |
End bp | 96094 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641679821 |
Product | ABC transporter related |
Protein accession | YP_001806804 |
Protein GI | 172059152 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 0.610645 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCGCA GCGAACGGGA GGAACGCGAA TTGAGCGGCG TCGAGAGCGG CACGCCCGCG CTGGAGATCA CGGGCCTCGA GGCCTGGTAC GGAGAATCCC ACATATTGCA CGGCGTCGAC CTGAGCGTTC ATCGCGGCGA GGTCGTGACG CTGCTCGGCC GCAACGGCGC GGGCCGCACC ACGACGCTGC GCGCGATCAT GGGCCTCACC GGCCGCCGCA GTGGGTCGAT CAAGGTCGCG GGCAACGAGA CGATCGGCCT CGCGACGCAC CGCATCGCGC ATTTCGGCGT CGGCTATTGC CCGGAGGAGC GCGGGATCTT CTCGAGCCTG TCGTGCGAGG AGAACCTGAT GCTGCCGCCG CTGATCGGGC CGCGCGAGCA TGCGATGCCG CTCGACGAGA TCTACGCGAT GTTCCCGAAT CTCGCGTCGC GCCGGCAGAG CCAGGGCACG CGGTTGTCCG GCGGCGAGCA GCAGATGCTC GCGGTGGCGC GGATCCTGCG CACCGGCGCG AACCTGCTGC TGCTCGACGA AATCTCCGAA GGCCTCGCGC CGGTGATCGT GCAGGCGCTC GCGCGCATGA TCATCGCGCT GAAGGCGCGC GGCTACACGG TCGTGATGGT CGAACAGAAT TTCCGCTTTG CCGCGCCGCT CGCCGACCGC TTCTACGTGA TGGAGCATGG CCGCATCGTC GAGCATTTCC GTGCATCCGA ACTGGAAGGC AAGATGCCGA TCCTTCACGA CCTGCTTGGG GTGTGA
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Protein sequence | MKRSEREERE LSGVESGTPA LEITGLEAWY GESHILHGVD LSVHRGEVVT LLGRNGAGRT TTLRAIMGLT GRRSGSIKVA GNETIGLATH RIAHFGVGYC PEERGIFSSL SCEENLMLPP LIGPREHAMP LDEIYAMFPN LASRRQSQGT RLSGGEQQML AVARILRTGA NLLLLDEISE GLAPVIVQAL ARMIIALKAR GYTVVMVEQN FRFAAPLADR FYVMEHGRIV EHFRASELEG KMPILHDLLG V
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