Gene BamMC406_0073 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_0073 
Symbol 
ID6178805 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp83160 
End bp84644 
Gene Length1485 bp 
Protein Length494 aa 
Translation table11 
GC content70% 
IMG OID641679808 
Productintegral membrane sensor signal transduction histidine kinase 
Protein accessionYP_001806791 
Protein GI172059139 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTTCTG ATCCGGCTGT CACCACCAGC CTGCGCCGCT CGCTGCTCAG ACGCCTCGCC 
GCGCCGCTGT CGATGCTCGC GCTGATGAGC GGCCTGATTG CCTACTGGCT CGCGTGGCAA
TACACGCAAC ACGTGATCGA CCGCTCGCTC GCCGATCTCG CGACCGCCAT CTCCAAACAG
ATCCAGATCG CCGGCCCCGA CGCGCCGTTC ACGGTGCCGC CGCTCGCGCA GGCGATGTTC
TCCGATCCGG CCGAGGCGCT GATCTACCGG ATCAGCGACG GCGAGGAGGA GCTCGCCGGC
GATCCGAAGC TGCCGCTGCG CGGCATCAAC GTGCGCCGCA TGCATCACGC GTATGTGTTC
GAGGCCGAGT ATGACAACCG CGCAGTGCGG GTCGCGCAGG TGCGCGTCGA GGAAGTCGAC
GGCGGCCGGC CGATGGTGGT CGAGGTCGCG CAGCCGGTGC GGCACCGCTA CCGGATCGCC
GCCGAATTCC TCGTCGCGAT CATGATGCCG CTGCTGCTGT TGCTGCTGGC GGGCTGGGGC
ATCGTGTGGC GCGTCGTGAA CCAGCAGCTC GGCCCGCTCA CGCATCTCGC CGATTCACTG
AACCGGCAGA CCCACACGTC GCTGGAGCCG GTCGACGAAA CCGACGTGCC GCTCGAGATC
CGGCCGCTGA CGAGTGCGAT GAACGCGCTG CTCGGCCGCC TGAAGACCGC GCTCGACGCG
CAGCGCAAGT TCATCGCCGA TGCCGCGCAC CAGTTGCGCA CGCCGCTCAC CGCCGTGAAG
CTGCATGCCG AGCAGGCCGC CGTCGCGCGC GACCCGCAGC AGACCTACGC CGCGGTGCGC
GAGCTGCGCG CGGCCGCCGA CCGCGCGGTG CGGCTGTCGA ACCAGTTGCT GTCGCTCGCG
CGGGCGGAGC CGGGCGAACA GGCCGCGCGT TTCGTCGACG TCGACCTCGC CGCGATGGCA
TTCGAGACAG GTGCCGAATG GGTGCCGCGC GCGCTCGCGG CGCATGTCGA CCTCGGCTTC
CAGCGCAGCG ACGAACCCGA CGAAGACGAA ACGCTGAACG TGCGCGGCAA CCCCGTGCTG
CTGCGCGAGG TGATCGCGAA CCTGCTCGAC AATGCGTTGA AATACGTGCC GCTCGCACGC
CCGGACGGGG CGCGAATCAC GGTGAACGTC GCGCGCGGCG CGCTCGAGGG CGGCCAGCCG
GCCGCCGAGA TCGTCGTCGA GGACAACGGC CCGGGCGTGC CGGCCAGTCA GCAGGCCGAC
CTGTTCAAGC GCTTTTTCCG CGGCGATGCG CAAAGCGGCA ACGGCGTCGA GACGGGCGCC
GGGCTGGGGC TCGCGATCGT CCACGACATC ATCGCGATGC ACGGCGGCAC GGTGTCGTAC
GAGGATGCAT CGGAAGGCGG TTCGCGCTTC GTCGTGCGCG TGCCGCTCGC CAAGCGTACC
GAGAAGCCGG CGAGCGAAAC GCCGGCCGCC GCGCCGACGC ACTGA
 
Protein sequence
MSSDPAVTTS LRRSLLRRLA APLSMLALMS GLIAYWLAWQ YTQHVIDRSL ADLATAISKQ 
IQIAGPDAPF TVPPLAQAMF SDPAEALIYR ISDGEEELAG DPKLPLRGIN VRRMHHAYVF
EAEYDNRAVR VAQVRVEEVD GGRPMVVEVA QPVRHRYRIA AEFLVAIMMP LLLLLLAGWG
IVWRVVNQQL GPLTHLADSL NRQTHTSLEP VDETDVPLEI RPLTSAMNAL LGRLKTALDA
QRKFIADAAH QLRTPLTAVK LHAEQAAVAR DPQQTYAAVR ELRAAADRAV RLSNQLLSLA
RAEPGEQAAR FVDVDLAAMA FETGAEWVPR ALAAHVDLGF QRSDEPDEDE TLNVRGNPVL
LREVIANLLD NALKYVPLAR PDGARITVNV ARGALEGGQP AAEIVVEDNG PGVPASQQAD
LFKRFFRGDA QSGNGVETGA GLGLAIVHDI IAMHGGTVSY EDASEGGSRF VVRVPLAKRT
EKPASETPAA APTH