Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_0061 |
Symbol | |
ID | 6176387 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | - |
Start bp | 67211 |
End bp | 68710 |
Gene Length | 1500 bp |
Protein Length | 499 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 641679796 |
Product | general secretory pathway protein E |
Protein accession | YP_001806779 |
Protein GI | 172059127 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
TIGRFAM ID | [TIGR02533] general secretory pathway protein E |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCAACG TGCTCGCGTC CTCGACCCAG GACGGCGCGC CGGGCGAACG GCAGCCGCCG TCGCCGCTCG CCGCGCGCCT GTTGCCGTAC GGCTTCGCGA AGAGCGGCCA GGTGCTGATC GCGCACCAGC TCGACGACAC GCTCGAGGTG TGGATCAGCG AGCGCACGAA CGACGCGGCG CTCGCCGAAA TCGCGCGCAA CTTCGGCTCG ATTTCCGTGC ACCGCGTGCC GGCCGACGAG CTCGCGCAGG CGATCAACCA GGCGTACGCG CGCCAGGACG GCAGCGCCGC GCAGGTCGTC GGCGAGGTCG AAGGCGAAGT CGACCTGTCG CGACTGATGC AGGACATCCC CGAAGTCGAG GATCTGCTCG AATCGGAAGA CGACGCGCCG ATCATCCGGA TGATCAACGC GCTGCTCACG CAAGCGGCGC GCGAACAGGC GTCGGACATT CACATCGAGC CGTTCGAGAA TGCGTCGGTC GTGCGGTTTC GCGTCGACGG CACGCTGCGC GACGTCGTGC GGCCGAAGAA GGCGCTGCAC GGCGCGCTGA TCTCGCGGAT CAAGATCATG GCGCAGCTCG ACATCGCCGA GAAACGCCTG CCGCAGGACG GCCGCATCAC GCTGCGCGTC GGCGGCCGGC CGGTCGACGT GCGGGTGTCG ACGCTGCCGA CCGGGCACGG CGAGCGTGCG GTGCTCCGTC TGCTGGAAAA GGATGCGCAG CGCCTGAACC TCGAAGCGCT CGGGATGGGC CGCGACACGC TCGTCCAGTT CGACAAGCTG ATCGGCCGCC CGCACGGGAT CGTGCTGGTC ACGGGCCCGA CCGGCTCGGG CAAGACGACC ACGCTCTATG CGTCGATGTC GCGGCTCGAA ACGGCGACGA CCAACATCAT GACCGTCGAG GATCCGATCG AATACGACCT GTCCGGCATC GGCCAGACGC AGGTGAACGA GCGGATCGGG ATGACCTTTG CCCGTGCGCT GCGTTCGATC CTGCGTCAGG ATCCGGACGT GATCATGATC GGCGAAATCC GCGACCTCGA AACCGCGCAG ATCGCGGTGC AGGCATCGCT CACGGGCCAC CTCGTGCTCG CGACGCTGCA CACCAACGAC GCGGCCTCGG CGGTCACGCG TCTGACCGAC ATGGGCGTCG AGCCGTACCT GCTCGCGTCG TCGCTGCTCG GCGTGCTCGC GCAGCGTCTG GTGCGCCAGC TCTGCTCTGT GTGCAAGGAA GAGCGGCACG AGGACGGCCG CACCGTGTGG CATCCGGTCG GCTGCGACCG GTGCGGGCAT TCGGGCTATG CGGGCCGGCG CGGCGTATAC GAACTGCTGC TGATCGACGA TTCGATCCGC GCGCTGATCC ACCGCAACGC GGCCGATGCG GAGATTCTCG CCACGGGGCG CGCACAAGGG ATGCGCACGC TGCGCGACGA CGCCGAGCGC TGGCTCGCGG CTGGCGCGAC GTCGCTCGAG GAAGTGCTGC GCGTGACGGG AGGCGCATAG
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Protein sequence | MSNVLASSTQ DGAPGERQPP SPLAARLLPY GFAKSGQVLI AHQLDDTLEV WISERTNDAA LAEIARNFGS ISVHRVPADE LAQAINQAYA RQDGSAAQVV GEVEGEVDLS RLMQDIPEVE DLLESEDDAP IIRMINALLT QAAREQASDI HIEPFENASV VRFRVDGTLR DVVRPKKALH GALISRIKIM AQLDIAEKRL PQDGRITLRV GGRPVDVRVS TLPTGHGERA VLRLLEKDAQ RLNLEALGMG RDTLVQFDKL IGRPHGIVLV TGPTGSGKTT TLYASMSRLE TATTNIMTVE DPIEYDLSGI GQTQVNERIG MTFARALRSI LRQDPDVIMI GEIRDLETAQ IAVQASLTGH LVLATLHTND AASAVTRLTD MGVEPYLLAS SLLGVLAQRL VRQLCSVCKE ERHEDGRTVW HPVGCDRCGH SGYAGRRGVY ELLLIDDSIR ALIHRNAADA EILATGRAQG MRTLRDDAER WLAAGATSLE EVLRVTGGA
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