Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BamMC406_0057 |
Symbol | |
ID | 6178749 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia ambifaria MC40-6 |
Kingdom | Bacteria |
Replicon accession | NC_010551 |
Strand | - |
Start bp | 64326 |
End bp | 64874 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 641679792 |
Product | general secretion pathway protein H |
Protein accession | YP_001806775 |
Protein GI | 172059123 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2165] Type II secretory pathway, pseudopilin PulG |
TIGRFAM ID | [TIGR01708] general secretion pathway protein H [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.12302 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCCGCCC TTCGCACGCC CTTGCGCTCC GCTCGCGCTC GCCGCGCTGC CCGTGACCGC CGCGTGCGGC GCGGCGCGGC CGTGACCGCG GCACGCACGC GTGTCCGCGG CTTCACGCTG CTCGAGATGC TGGTCGTGCT CGTGATCGCG GGCCTGCTGG TGTCGCTCGC GTCGCTGTCG CTCACGCGCA ATCCGCGCAC CGACCTGCGC GAGGAAGCGC AGCGCATCGC GCTGCTGTTC GAGACGGCCG GCGACGAAGC GCAGGTGCGC GCGCGCCCGA TCGCGTGGCA GCCGACCGCG CACGGCTTTC GTTTCGACGT GAGTTCGCCC GACGGCTGGC GCACGCTGCG CGACGACCTG CTGCGTCCGC GCGACTGGGA CGGTGGCGTC ACGGGCGCCG AAATCGACTA TCCGGGGTCC GACACGCATG CGAGCACGGT CGTGTTCGGC ACCGAAAGCG TCGACATGCC GGTGCGCGTG ACGCTGCATT CGGCGGTCGG TAGCGCGACG ATCGTCGGCA CCGGCAACGG CCGGTACGAG GTGCAATGA
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Protein sequence | MPALRTPLRS ARARRAARDR RVRRGAAVTA ARTRVRGFTL LEMLVVLVIA GLLVSLASLS LTRNPRTDLR EEAQRIALLF ETAGDEAQVR ARPIAWQPTA HGFRFDVSSP DGWRTLRDDL LRPRDWDGGV TGAEIDYPGS DTHASTVVFG TESVDMPVRV TLHSAVGSAT IVGTGNGRYE VQ
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