| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0055 |
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| Symbol | |
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| ID | 6176954 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 63240 |
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| End bp | 63914 |
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| Gene Length | 675 bp |
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| Protein Length | 224 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 641679790 |
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| Product | putative general secretion pathway protein J |
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| Protein accession | YP_001806773 |
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| Protein GI | 172059121 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4795] Type II secretory pathway, component PulJ |
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| TIGRFAM ID | [TIGR01711] general secretion pathway protein J
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0954003 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGGCGCC GTCCCATGCG TTTCGCCGGC TCGCGCCGCG TGCGCGGCTT CACGCTGATC
GAACTGATGA TCGCGATCGC GATCCTCGCG GTGGTCGCGA TCCTCGCGTG GCGCGGGCTC
GACCAGATCA TGCGCGGCCG CGACAAGGTC GCGTCCGCGA TGGAAGACGA GCGCGTGTTC
GCGCAGATGT TCGACCAGAT GCGCATCGAC GCGCGGCTCG CCGCGACCGA CGACGAAGCC
GGCCAGCCGG CGATCGGCGT CGCCGGCAAT ACGCTGCAGA TCGTCCGCAC GCTCGACTTG
GCCGGCGCCG CGCCGCGGCT GCAGGTGGTC CGCTACCGGA TCGCCGGCGG GCGCGTCGTG
CGCTATGCAT CGCCGCCGCT CGCCGATGCG AACCGCTTGC GCGACGTGCT GAAGGACAGC
GGCGTCGACG GCTGGAACTG GGTCGCGCTG ATGGGCGGCG TCGGTGCGAT CGACGCGAAG
CTGTACGTGC CGCGCGTCGG CTGGACCACC AACCTGCAGA CGGCCAATGA CGCGCTGTCG
CAGAACAACG ATGCGCTGAA GGTGCCGCAG ATCGGCAACG CGCCGCCGAC ACGCGCGGTG
ACGGGGCTGC AGGTCAGCAT CGGCGCGACG TCGCTGCGCG TGCCCGTCAC GCGCATCTTC
CTCGTCGGGG AATGA
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| Protein sequence | MRRRPMRFAG SRRVRGFTLI ELMIAIAILA VVAILAWRGL DQIMRGRDKV ASAMEDERVF
AQMFDQMRID ARLAATDDEA GQPAIGVAGN TLQIVRTLDL AGAAPRLQVV RYRIAGGRVV
RYASPPLADA NRLRDVLKDS GVDGWNWVAL MGGVGAIDAK LYVPRVGWTT NLQTANDALS
QNNDALKVPQ IGNAPPTRAV TGLQVSIGAT SLRVPVTRIF LVGE
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