Gene BamMC406_0042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_0042 
SymbolfliL 
ID6177261 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp51229 
End bp51765 
Gene Length537 bp 
Protein Length178 aa 
Translation table11 
GC content68% 
IMG OID641679777 
Productflagellar basal body-associated protein FliL 
Protein accessionYP_001806760 
Protein GI172059108 
COG category[N] Cell motility 
COG ID[COG1580] Flagellar basal body-associated protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.200475 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATGCTA CGAGACATCA CGCACGCATT CACATGGCCT CCACGACTGC AAACCCGACT 
GCCGACAAGC CGGCTTCGTC CGGCAAGTTC AAGCGCATCG CGCTCATCGC CGTCATCGCG
CTGGGCGCGG CCGCCGCCGC CGCGGGCGGC ATGTACGTGT TCCTGAGCAA GGCGGGCGTC
GGCCACGCGA GCGCGCCCGC CGAACCGGCG CCGCTCGCCG CGCCGGTGTT CTTCCCGCTC
GACCCGCTGA CCGTGAACCT GCAGTCGGAC GACGGCGTGC AGCATTACCT GCGAGTCGGC
CTGTCGCTGA AGCTCACCGA CCCGAAGGCG CAGGAGCAGC TGACCGCGCG CATGCCGGAG
ATCCGCAGCC GGATCCTGCT CGCGCTGTCG AACAAGCATC CCGAGGACCT CGCGACACCG
GAGGGCAAGC GTTCGCTCGC GAAGGAACTG CGCGAGCTGA TCGAGCAGCC GACGCAGCCG
GGCAACCAGC GCGCGAAGGT CGACGACGTG CTGTTCACCG AATTCGTCGT CCAGTAA
 
Protein sequence
MHATRHHARI HMASTTANPT ADKPASSGKF KRIALIAVIA LGAAAAAAGG MYVFLSKAGV 
GHASAPAEPA PLAAPVFFPL DPLTVNLQSD DGVQHYLRVG LSLKLTDPKA QEQLTARMPE
IRSRILLALS NKHPEDLATP EGKRSLAKEL RELIEQPTQP GNQRAKVDDV LFTEFVVQ