Gene BamMC406_0034 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBamMC406_0034 
Symbol 
ID6176381 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia ambifaria MC40-6 
KingdomBacteria 
Replicon accessionNC_010551 
Strand
Start bp45202 
End bp45999 
Gene Length798 bp 
Protein Length265 aa 
Translation table11 
GC content66% 
IMG OID641679769 
ProductABC transporter related 
Protein accessionYP_001806752 
Protein GI172059100 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1116] ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCAGG CAGTTTCCCC GAGCACGCCG GCGATCGAGT TTCGCAATGT GTCGTGCCGC 
TTCATTTCGC CGGAAGGCAA GGCCACCGTC GCGCTGCGCG ACTTCAGCAT GAGCGTCGCG
CGCGGCGAGT TCATCGCGAT CGTCGGGCCG ACCGGCTGCG GCAAGTCGAC CACGCTGAAC
CTGATCACCG GGCTGCTCAA GCCGGTGTCG GGCGAGGTGC GCGTGATGGG TCGCCCGGTC
GACGGGATCG ACCCGCGCAT CGGCTTCGTG TTCCAGGCGG ATGCCGTGTT CCCGTGGCGC
AACGTGATCG ACAACGTCGC GGCAGGCCCG TTATTTCGCG GCCGCTCGAA GGACGTCGCG
TACACGCAGG CCGAGGAATG GATCCGCAAG GTCGGCCTCG ACAAGTTCAC GAAGCACTAC
CCGCACCAGC TCTCCGGCGG GATGCGCAAG CGCGTCGCGC TCGCGCAGAC CTTCATCAAC
CAGCCGGAAA TCCTGCTGAT GGACGAGCCG TTCTCCGCGC TCGACATGCA GACGCGCACG
CTGATGCAGG ACGAACTGCT GCAGCTGTGG TCCGCGAACA AGGGCTCGGT CGTGTTCGTC
ACGCACGATC TCGAGGAGGC GATCGCACTC GCCGACCGCG TGTTCGTGCT GACCGCGCGC
CCCGCGACGC TCAAGCGCGT GTACGAGATC GACCTGCCGC GCCCGCGCGT CATGTCGGAA
GTGCGCTACG ACGCGCGCTT CGTCGAAATT TCCAAGGACA TCTGGCACGA CCTGCGCGAA
GAAGTGCAGA TCGGCTGA
 
Protein sequence
MNQAVSPSTP AIEFRNVSCR FISPEGKATV ALRDFSMSVA RGEFIAIVGP TGCGKSTTLN 
LITGLLKPVS GEVRVMGRPV DGIDPRIGFV FQADAVFPWR NVIDNVAAGP LFRGRSKDVA
YTQAEEWIRK VGLDKFTKHY PHQLSGGMRK RVALAQTFIN QPEILLMDEP FSALDMQTRT
LMQDELLQLW SANKGSVVFV THDLEEAIAL ADRVFVLTAR PATLKRVYEI DLPRPRVMSE
VRYDARFVEI SKDIWHDLRE EVQIG