| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0030 |
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| Symbol | |
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| ID | 6178765 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Burkholderia ambifaria MC40-6 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010551 |
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| Strand | - |
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| Start bp | 40761 |
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| End bp | 41990 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641679765 |
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| Product | outer membrane protein (porin)-like protein |
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| Protein accession | YP_001806748 |
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| Protein GI | 172059096 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG3203] Outer membrane protein (porin) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTATGCG TCGGCCTCTC GCTGTGGTCG GCGACATCCG GCATACATTA CGTACTGCCG
ACGAACAGAT TTCAATGCGG CAGCTCGGAG GAGACGATCT TGAAACGAAA AACCCTTGCC
CTTTCCATCG CGGCGGCTGG CCTGTGCGCC GGCACCCAGG CGCATGCGCA ATCGAGCGTG
CAGCTCTACG GCCTGATGGA CCTGAGCTTT CCGACCTACC GGACCCACGC CGACGCGAAC
GGCAAACACG TGATCGGGAT GGGCAACGAA GGCGAGCCGT GGTTCAGCGG CAGCCGCTGG
GGCCTGCGAG GCGCTGAAGA CATCGGCGGC GGCACGAAGA TCATCTTCCG CCTCGAAAGC
GAATTCGTGG TCGCGAACGG CCAGATGGAA GACGAAGGCC AGATCTTCGA CCGCGACGCA
TGGGTCGGCG TCGAGGACGA ACGTTTCGGC AAGCTGACGG CCGGCTTCCA GAACACGATC
GCGCGCGACG CAGCGGCGAT CTACGGCGAC GCATACGGCT CGGCGAAGCT GACCACCGAG
GAAGGCGGCT GGACCAATTC GAACAACTTC AAGCAGATGA TCTTCTACGC GGCCGGCCCG
ACCGGCACGC GCTACAACAA CGGCCTCGCG TGGAAGAAGC TGTTCAGCAA CGGCATCTTC
GCGAGCGCCG GCTACCAGTT CAGCAACTCG ACCGCGTTCG CGACGGGTTC CGCGTACCAG
GTCGCGCTCG GCTACAACGG CGGGCCGTTC GCCGTGTCGG GCTTCTACAA CCACGTGAAC
CACGGCGGCT TCCGGAACCA GACGTTCTCG GTCGGCGGCA ACTATACGTT CAGCATCGTG
CGCCTGAATG CCGGCTACTT CCGCTACAAC GGCGACCAGG GCTCGCTCGG CCAGCGTCAC
GACGATTCGT GGACGGTGTC GATGAAGATC GCGCCGAAGG GTGCGCTCGA CTACGAGCTC
GGCTACCAGC AGATGCGGGT CAAGAACGCC GCGTACAACG CGGACGGCTT CGTCCCGAAT
GCGAACCTCG GAGCCTTCAG CCTGACCAAC GGTGTCGGCA ACGGCTTCAA GGAGACGATC
TACGGGTCGG TGTTCTACCA CCTGAGCAAG CGTACCGAAC TGTACCTGGC CGGCGACTAC
ATGCGCCTGC ACGGCGGCTA CACGGTGTCG TCGACGTTCG GCGCGAAAAA CCAGCTCGAA
CTCACGTCGG GCATCCGCAC GCGCTTCTGA
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| Protein sequence | MLCVGLSLWS ATSGIHYVLP TNRFQCGSSE ETILKRKTLA LSIAAAGLCA GTQAHAQSSV
QLYGLMDLSF PTYRTHADAN GKHVIGMGNE GEPWFSGSRW GLRGAEDIGG GTKIIFRLES
EFVVANGQME DEGQIFDRDA WVGVEDERFG KLTAGFQNTI ARDAAAIYGD AYGSAKLTTE
EGGWTNSNNF KQMIFYAAGP TGTRYNNGLA WKKLFSNGIF ASAGYQFSNS TAFATGSAYQ
VALGYNGGPF AVSGFYNHVN HGGFRNQTFS VGGNYTFSIV RLNAGYFRYN GDQGSLGQRH
DDSWTVSMKI APKGALDYEL GYQQMRVKNA AYNADGFVPN ANLGAFSLTN GVGNGFKETI
YGSVFYHLSK RTELYLAGDY MRLHGGYTVS STFGAKNQLE LTSGIRTRF
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