| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BamMC406_0014 |
|---|
| Symbol | |
|---|
| ID | 6176701 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia ambifaria MC40-6 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010551 |
|---|
| Strand | - |
|---|
| Start bp | 24061 |
|---|
| End bp | 24591 |
|---|
| Gene Length | 531 bp |
|---|
| Protein Length | 176 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641679748 |
|---|
| Product | cytochrome B561 |
|---|
| Protein accession | YP_001806732 |
|---|
| Protein GI | 172059080 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG3038] Cytochrome B561 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.00000000167547 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGGCGA CTACGACGTT TAGCTTGCCG GCGAGGGTGC TGCATTGGGT GATGGCCGCG
ATGATTCTCA CGATGTTGTT TATTGGCGTG GGAATGGTGG CGTCCATTTC CGAGCGGCAT
GATTTCCTGG TGGCTTTGCA TAAGCCGCTG GGGGTTGCGG TGCTGGTATT GGTTTGTGTG
CGGATCGTGG TGCGCTTCGT GTCGAAGCCG CCGGCGTTGC CCGCGGATCT GCCCGTCTGG
CAGAAGGTGG CCGCGCATGG GTCGCATCTC GTGCTGTATG CGCTGATGGT CGCGATGCCG
CTGATCGGCT GGGCGATGCT GTCGGCTGGC GGGTATCCGG TGACGCTGGG CGGCGGCGTG
CAGTTGCCGG GGCTGGTTTC GGCGGATCCG GTGACATTTG CCTGGCTCCG GGTCGCGCAC
CGGCTGCTGG CCTACCTGTT CTTCGCTACG TTCGTCGCGC ACTTTGCGGC CGCGCTGTAT
CACGGCTTGA TCCGGAGGGA TGGGGTGGTG AGGGCGATGG TGGGGCGGTG A
|
|---|
| Protein sequence | MKATTTFSLP ARVLHWVMAA MILTMLFIGV GMVASISERH DFLVALHKPL GVAVLVLVCV
RIVVRFVSKP PALPADLPVW QKVAAHGSHL VLYALMVAMP LIGWAMLSAG GYPVTLGGGV
QLPGLVSADP VTFAWLRVAH RLLAYLFFAT FVAHFAAALY HGLIRRDGVV RAMVGR
|
|---|
| |