Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pnec_R0005 |
Symbol | |
ID | 6184075 |
Type | rRNA |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
Kingdom | Bacteria |
Replicon accession | NC_010531 |
Strand | + |
Start bp | 35994 |
End bp | 38804 |
Gene Length | 2811 bp |
Protein Length | |
Translation table | |
GC content | 50% |
IMG OID | 641670771 |
Product | 23S ribosomal RNA |
Protein accession | |
Protein GI | |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00000000415138 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 0.00000000363122 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | GATCAAGTGA ATAAGTGCAC ATGATGGATG CCTTGGCGAT TACAGGCGAC GAAGGACGTT ATAACCTGCG ATAAGCCTCG GGGAGCTGGT AAATAAGCTT TGATCCGGGG ATTTCTGAAT GGGGAAACCC ACCACTTTTG TGGTATCCAT ACCTGAATAC ATAGGGTATG TGAAGCGAAC CTCGTGAACT GAAACATCTA AGTAGCGAGA GGAAAAGACA TCAACCGAGA TTCCCAAAGT AGTGGCGAGC GAAATGGGAA GAGCCTTCTA GTGATAACTC AGTAATTAAC AGAATGGAAT GGAAAGTCCA ACAATAAAGG GTGATAGTCC CGTATGTGAA AATTATTGGG TGGTACTAGG CTAGAGACAA GTAGGGCGGG ACACGTGAAA TCCTGTCTGA ATATGGGGGG ACCATCCTCC AAGGCTAAAT ACTCGTAATC GACCGATAGT GAACAAGTAC CGTGAGGGAA AGGCGAAAAG AACCCCGGGA GGGGAGTGAA ATAGATCCTG AAATTGTGTG CATACAAACA GTAGGAGCCT CGTAAGGGGT GACTGCGTAC CTTTTGTATA ATGGGTCAGC GACTTACATT CAGTAGCAAG CTTAACCAAA TAGGGAAGGC GTAGCGAAAG CGAGTCCGAA TAGGGCGCTA GTTGCTGGGT GTAGACCCGA AACCAGTTGA TCTATCCATG GCCAGGTTGA AGGTGCGGTA ACGCGTACTG GAGGACCGAA CCCACTAACG TTGAAAAGTT AGGGGATGAG CTGTGGATAG GGGTGAAAGG CTAAACAAAA CTGGAAATAG CTGGTTCTCT CCGAAAACTA TTTAGGTAGT GCCTCGTGTA TCACTGTAGG GGGTAGAGCA CTGTCATGGT AGTGGGGTCC ATTGCGGATT ACTGCACCAT AGCAAACTCC GAATACCTAC AAGTGCGAGC ACGGGAGACA GACATCGGGT GCTAACGTCC GGTGTCAAGA GGGAAACAAC CCAGACCGCC AGCTAAGGTC CCTAATATAT GCTAAGTGGG AAACGAAGTG GGAAGGCTAA AACAGTCAGG AGGTTGGCTT AGAAGCAGCC ATCCTTTAAA GAAAGCGTAA TAGCTCACTG ATCGAGTCGT CTTGCGCGGA AGATGTAACG GGGCTAAGCA TGTAACCGAA GCTGCGGATC ACGTAAGTGA TGGTAGGAGA GCGTTCTGTA AGCCTGTGAA GGTGTCTTGT AAAGGATGCT GGAGGTATCA GAAGTGCGAA TGCTGACATG AGTAGCGATA AAGGGGGTGA AAAGCCCCCT CGCCGTAAGC CCAAGGTTTC CTGTTCAACG TTCATCGGAA CAGGGTGAGT CGGCCCCTAA GGCGAGGCAG AGATGCGTAG CCGATGGGAA CAAGGTTAAT ATTCCTTGAC CATTGTTAGA TGCGATGGGG GGACGGATCG CGGAAAGTTG TCCGGGTGTT GGATGTCCCG GTTCTTGCGT TGGAGATGGC TATTAGGTAA ATCCGGTAGC GTAATTCAAG GACGTGAGAC GAGCGAATTT ATTCGCGAAG CAATTGGAAG TGGTTCCAAG AAAAGCCTCT AAGCTTCAGT CTAACAAGAC CGTACCGCAA ACCGACACAG GTGGGCGAGA TGAGTATTCT AAGGCGCTTG AGAGAACTCA GGAGAAGGAA CTCGGCAAAT TTGCACCGTA ACTTCGGGAT AAGGTGCGCC TTTGTAGTTT GACCATGAAC GATGGAAGGA CGAAAGGGTT GCAATAAAAA GGTGGCTGCG ACTGTTTAAT AAAAACACAG CACTCTGCAA ACACAAAAGT GGACGTATAG GGTGTGACGC CTGCCCGGTG CTGGAAGATT AAATGATGGG GTGCAAGCTC TTGATTGAAG TCCCAGTAAA CGGCGGCCGT AACTATAACG GTCCTAAGGT AGCGAAATTC CTTGTCGGGT AAGTTCCGAC CTGCACGAAT GGCGTAACGA TGGCCACACT GTCTCCTCCT GAGACTCAGC GAAGTTGAAA TGTTTGTGAT GATGCAATCT ACCCGTGGCT AGACGGAAAG ACCCCATGAA CCTTTACTGT AGCTTTGCAT TGGACTTTGA ATCGGTCTGT GTAGGATAGG TGGGAGGCGT TGATAACAGG ATGCTAGTTC TGTTGGAGCC AACCTTGAAA TACCACCCTG ATTTATTTGA GGTTCTAACC TTGGCCCGTT ATCCGGGTCG GGAACAGTGC ATGGTAGGCA GTTTGACTGG GGCGGTCTCC TCCCAAAGTG TAACGGAGGA GTACGAAGGT ACGCTTGGTA CGGTCGGACA TCGTACCTAA AGTGCAATGG CAAAAGCGTG CTTAACTGCG AGACCGACAA GTCGAGCAGG TGCGAAAGCA GGTCATAGTG ATCCGGTGGT TCTGTATGGA AGGGCCATCG CTCAACGGAT AAAAGGTACT CTGGGGATAA CAGGCTAATA CCGCCCAAGA GTTCATATCG ACGGCGGTGT TTGGCACCTC GATGTCGGCT CATCTCATCC TGGGGCTGTA GCCGGTCCCA AGGGTATGGC TGTTCGCCAT TTAAAGAGGT ACGTGAGCTG GGTTTAAAAC GTCGTGAGAC AGTTTGGTCC CTATCTGCCA TGGGCGTTGG AGATTTGACG GGGGCTGCTC CTAGTACGAG AGGACCGGAG TGGACGTACC GCTGGTGTAC CTGTTGTTTC GCCAGAAGCA TCGCAGGGTA GCTATGTACG GAAGAGATAA CCGCTGAAAG CATCTAAGCG GGAAACTTGC CTGAAGATGA GATCTCCCGT AGATTTAACC TACATAAAGG GTCGTTGAAG ACCACAACGT TGATAGGTCG G
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Protein sequence | |
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