Gene Pnec_1746 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPnec_1746 
Symbol 
ID6183473 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePolynucleobacter necessarius subsp. necessarius STIR1 
KingdomBacteria 
Replicon accessionNC_010531 
Strand
Start bp1528222 
End bp1528887 
Gene Length666 bp 
Protein Length221 aa 
Translation table11 
GC content47% 
IMG OID641672249 
ProductCarbonate dehydratase 
Protein accessionYP_001798419 
Protein GI171464306 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0288] Carbonic anhydrase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones37 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones83 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATGA AGAATTCCCA AGCCCTAGAG CAACTTTTCT CAAACAATCG CGCCTGGGCC 
GAAAGCATGG TCGCCAAGGA TGCCGACTTC TTTAAGCGCC TGGTTTCACA ACAGGCCCCT
GAATACCTTT GGATCGGCTG CTCTGATAGT CGCGTTCCAG CAAATGACAT TGTTAATTTA
TTACCCGGCG AATTATTTGT ACATCGAAAT GTAGCGAACG TTGTAGTTCA TACAGATTTG
AATTGCTTGT CAGTCATTCA GTTCGCCATT GACTTGCTGA AAGTAAAACA CATATTGGTT
GTGGGTCACT ACGGCTGTTC TGGTGTGCAT ACTGCATTAG CTGATAAACG CGTTGGCTTA
GCCGATAACT GGCTGCGTCA CGTTAAAGAC GTGCATCAAA AACATGAACG CTACCTTGGC
GACATGATCC CAACCCCTAA GCGACAAGAT CGACTATGCG AGCTCAACGT GATTGAGCAA
GTGGTAAATG TTTGCGAAAC AACTATTGTG CAAGACGCCT GGGCGCGTGG ACAAAACCTC
ACCGTTCATG GCTGGGCTTA CCGACTTGAA ACCGGTCTGG TAAATGACTT AGGTGTGTCG
AGTAGCTCAA TCGAAGAAAT GTCTAAGCGT TATGCGAAGT CCGTAAAGCG CTACGAATTA
GAGTAA
 
Protein sequence
MTMKNSQALE QLFSNNRAWA ESMVAKDADF FKRLVSQQAP EYLWIGCSDS RVPANDIVNL 
LPGELFVHRN VANVVVHTDL NCLSVIQFAI DLLKVKHILV VGHYGCSGVH TALADKRVGL
ADNWLRHVKD VHQKHERYLG DMIPTPKRQD RLCELNVIEQ VVNVCETTIV QDAWARGQNL
TVHGWAYRLE TGLVNDLGVS SSSIEEMSKR YAKSVKRYEL E