| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pnec_1713 |
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| Symbol | |
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| ID | 6183664 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Polynucleobacter necessarius subsp. necessarius STIR1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010531 |
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| Strand | - |
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| Start bp | 1498236 |
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| End bp | 1498925 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 641672216 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_001798386 |
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| Protein GI | 171464273 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0702] Predicted nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 89 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGATCAATT TGGTGGGAGT CCTGCATGAC AAGCCCGCTC AGCCTTATGG AAAAGTATTT
AAGGCGGCAC ATGTAGATTT GCCAAAAAAT ATAATTACAG CGATGCAGTT ACATGGCTTA
AAGCGCTACT TGCACATGAG CGCGTTGGGA GCAGATTCTA ATGGCCCTTC TATGCATCAG
CGTAGTAAAG GTGACGGCGA GGCGGCTGTG AAAGCAAGCA ATTTGGATTG GACCATCTTT
AGGCCATCAG TAATTTTTGG CGCACAAGAT CAATTTACTA ATTTATTTTC TAAGTTAACA
AAGTTGTTCT CCGCCATACC TTTAGCCAAT CATCAAGCTC AGTTTCAACC TGTGAGCGTG
GACGATGTTG CTTCTGCATT TGTGAAATCC TTATCAATGC CCCAAACAAT TTATCAATCT
TATGACTTGG TGGGACCAAC GGTTTATACG ATGAAAGAAA TCGTTGAGTT TGCCGCGCGT
AGAGCAAAAA CAAGTTGTGC GATTATTCCT ATTCCTGCTT TTGTGGGTTA CTTGCAGGCG
CTTGTATTTG AATGCTTGCC AGGCCCAACC TTAATGTCAC GTGACAATAT TGCTTCCATG
CAGCTGCCAA ATACCTTGCC TATAAATGGT ATAGATGCGC TTACAGAGGT ATTCAAAATA
AGTCGTCGTA GCTTAGGGGG TATGCAGTAA
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| Protein sequence | MINLVGVLHD KPAQPYGKVF KAAHVDLPKN IITAMQLHGL KRYLHMSALG ADSNGPSMHQ
RSKGDGEAAV KASNLDWTIF RPSVIFGAQD QFTNLFSKLT KLFSAIPLAN HQAQFQPVSV
DDVASAFVKS LSMPQTIYQS YDLVGPTVYT MKEIVEFAAR RAKTSCAIIP IPAFVGYLQA
LVFECLPGPT LMSRDNIASM QLPNTLPING IDALTEVFKI SRRSLGGMQ
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